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Chellappa, S. Anirudh ; Pathak, Ankit Kumar ; Sinha, Prashant ; Jainarayanan, ASHWIN K. ; Jain, Sanjeev ; Brahmachari, Samir K. (2019) Meta-analysis of genomic variants and gene expression data in schizophrenia suggests the potential need for adjunctive therapeutic interventions for neuropsychiatric disorders Journal of Genetics, 98 (2). ISSN 0022-1333

Sinha, Prashant ; Jaiswal, Pragya ; Jainarayanan, Ashwin K. ; Brahmachari, Samir K. (2018) Intronic miRNA mediated gene expression regulation controls protein crowding inside the cell Gene, 679 . pp. 172-178. ISSN 0378-1119

Kumari, Renu ; Kumar, Deepak ; Brahmachari, Samir K. ; Srivastava, Achal K. ; Faruq, Mohammed ; Mukerji, Mitali (2018) Paradigm for disease deconvolution in rare neurodegenerative disorders in Indian population: insights from studies in cerebellar ataxias Journal of Genetics, 97 (3). pp. 589-609. ISSN 0022-1333

Singh, Harpreet ; Mallaiah, Raghuram ; Yadav, Gautam ; Verma, Nitin ; Sawhney, Ashu ; Brahmachari, Samir K. (2018) iCHRCloud: Web &Mobile based Child Health Imprints for Smart Healthcare Journal of Medical Systems, 42 (1). ISSN 0148-5598

Kaur, Divneet ; Kutum, Rintu ; Dash, Debasis ; Brahmachari, Samir K. (2017) Erratum: Data Intensive Genome Level Analysis for Identifying Novel, Non-Toxic Drug Targets for Multi Drug Resistant Mycobacterium tuberculosis Scientific Reports, 7 (1). ISSN 2045-2322

Sagner, Michael ; McNeil, Amy ; Puska, Pekka ; Auffray, Charles ; Price, Nathan D. ; Hood, Leroy ; Lavie, Carl J. ; Han, Ze-Guang ; Chen, Zhu ; Brahmachari, Samir Kumar ; McEwen, Bruce S. ; Soares, Marcelo B. ; Balling, Rudi ; Epel, Elissa ; Arena, Ross (2017) The P4 Health Spectrum – A Predictive, Preventive, Personalized and Participatory Continuum for Promoting Healthspan Progress in Cardiovascular Diseases, 59 (5). pp. 506-521. ISSN 0033-0620

Kaur, Divneet ; Mathew, Shalu ; Nair, Chinchu G. S. ; Begum, Azitha ; Jainanarayan, Ashwin K. ; Sharma, Mukta ; Brahmachari, Samir K. (2017) Structure based drug discovery for designing leads for the non-toxic metabolic targets in multi drug resistant Mycobacterium tuberculosis Journal of Translational Medicine, 15 (1). ISSN 1479-5876

Singh, Harpreet ; Yadav, Gautam ; Mallaiah, Raghuram ; Joshi, Preetha ; Joshi, Vinay ; Kaur, Ravneet ; Bansal, Suneyna ; Brahmachari, Samir K. (2017) iNICU – Integrated Neonatal Care Unit: Capturing Neonatal Journey in an Intelligent Data Way Journal of Medical Systems, 41 (8). ISSN 0148-5598

Dey, Rakesh ; Soni, Kartik ; Saravanan, Shanmugam ; Balakrishnan, Pachamuthu ; Kumar, Vikram ; Boobalan, Jayaseelan ; Solomon, Sunil Suhas ; Scaria, Vinod ; Solomon, Suniti ; Brahmachari, Samir K. ; Pillai, Beena (2016) Anti-HIV microRNA expression in a novel Indian cohort Scientific Reports, 6 (1). ISSN 2045-2322

Gupta, Sudheer ; Chaudhary, Kumardeep ; Kumar, Rahul ; Gautam, Ankur ; Nanda, Jagpreet Singh ; Dhanda, Sandeep Kumar ; Brahmachari, Samir Kumar ; Raghava, Gajendra P. S. (2016) Prioritization of anticancer drugs against a cancer using genomic features of cancer cells: A step towards personalized medicine Scientific Reports, 6 (1). ISSN 2045-2322

Dhanda, Sandeep Kumar ; Chaudhary, Kumardeep ; Gupta, Sudheer ; Brahmachari, Samir Kumar ; Raghava, Gajendra P. S. (2016) A web-based resource for designing therapeutics against Ebola Virus Scientific Reports, 6 (1). ISSN 2045-2322

Vashisht, Rohit ; Brahmachari, Samir K (2015) Metformin as a potential combination therapy with existing front-line antibiotics for Tuberculosis Journal of Translational Medicine, 13 (1). p. 83. ISSN 1479-5876

Vashisht, Rohit ; Bhat, Ashwini G ; Kushwaha, Shreeram ; Bhardwaj, Anshu ; Consortium, OSDD ; Brahmachari, Samir K (2014) Systems level mapping of metabolic complexity in Mycobacterium tuberculosis to identify high-value drug targets Journal of Translational Medicine, 12 (1). ISSN 1479-5876

Agrawal, Anurag ; Bhattacharya, Jaijit ; Baranwal, Nishant ; Bhatla, Sushil ; Dube, Salil ; Sardana, Viren ; Gaur, Devender R. ; Balazova, Danica ; Brahmachari, Samir K. (2013) Integrating Health Care Delivery and Data Collection in Rural India Using a Rapidly Deployable eHealth Center PLoS Medicine, 10 (6). e1001468. ISSN 1549-1676

Singla, Deepak ; Dhanda, Sandeep Kumar ; Chauhan, Jagat Singh ; Bhardwaj, Anshu ; Brahmachari, Samir K. ; Consortium, Open Source Drug Discovery ; Raghava, Gajendra P.S. (2013) Open Source Software and Web Services for Designing Therapeutic Molecules Current Topics in Medicinal Chemistry, 13 (10). pp. 1172-1191. ISSN 1568-0266

Vashisht, Rohit ; Bhardwaj, Anshu ; OSDD Consortium, ; Brahmachari, Samir K. (2013) Social networks to biological networks: systems biology of Mycobacterium tuberculosis Molecular BioSystems, 9 (7). p. 1584. ISSN 1742-206X

Gautam, Pramod ; Jha, Pankaj ; Kumar, Dhirendra ; Tyagi, Shivani ; Varma, Binuja ; Dash, Debasis ; Mukhopadhyay, Arijit ; Mukerji, Mitali ; Indian Genome, Variation Consortium (2012) Spectrum of large copy number variations in 26 diverse Indian populations: potential involvement in phenotypic diversity Human Genetics, 131 (1). pp. 131-143. ISSN 0340-6717

Singh, Harinder ; Chauhan, Jagat Singh ; Michael, M. ; Raghava, Gajendra P. S. ; Open Source Drug, Discovery Consortium (2011) ccPDB: compilation and creation of data sets from protein data bank Nucleic Acids Research, 40 (D1). D486-D489. ISSN 0305-1048

Chaki, Moumita ; Sengupta, Mainak ; Mondal, Maitreyee ; Bhattacharya, Abhisek ; Mallick, Shampa ; Bhadra, Ranjan ; Ray, Kunal ; Indian Genome, Variation Consortium (2011) Molecular and functional studies of tyrosinase variants among Indian oculocutaneous albinism type 1 patients Journal of Investigative Dermatology, 131 (1). pp. 260-262. ISSN 0022-202X

Bhardwaj, Anshu ; Scaria, Vinod ; Raghava, Gajendra Pal Singh ; Lynnd, Andrew Michael ; Chandra, Nagasuma ; Banerjee, Sulagna ; Raghunandan, Muthukurussi V. ; Pandey, Vikas ; Taneja, Bhupesh ; Yadav, Jyoti ; Dash, Debasis ; Bhattacharya, Jaijit ; Misra, Amit ; Kumar, Anil ; Ramachandran, Srinivasan ; Thomas, Zakir ; Brahmachari, Samir K. (2011) Open source drug discovery - a new paradigm of collaborative research in tuberculosis drug development Tuberculosis, 91 (5). pp. 479-486. ISSN 1472-9792

Saha, A. ; Nayak, S. ; Mani, K. R. ; Chandak, G. R. ; Ray, K. ; Mukhopadhyay, A. ; Indian Genome, Variation Consortium (2011) A set of five microsatellite markers linked to F8 gene can detect haemophilia a carriers across India Haemophilia, 17 (5). e928-e935. ISSN 1351-8216

Narang, Ankita ; Jha, Pankaj ; Rawat, Vimal ; Mukhopadhayay, Arijit ; Dash, Debasis ; Indian Genome Variation Consortium, ; Basu, Analabha ; Mukerji, Mitali (2011) Recent admixture in an Indian population of African ancestry The American Journal of Human Genetics, 89 (1). pp. 111-120. ISSN 0002-9297

Abhimanyu, * ; Mangangcha, Irengbam Rocky ; Jha, Pankaj ; Arora, Komal ; Mukerji, Mitali ; Banavaliker, Jayant Nagesh ; Brahmachari, Vani ; Bose, Mridula ; Indian Genome Variation Consortium, (2011) Differential serum cytokine levels are associated with cytokine gene polymorphisms in north Indians with active pulmonary tuberculosis Infection, Genetics and Evolution, 11 (5). pp. 1015-1022. ISSN 1567-1348

So, A. D. ; Gupta, N. ; Brahmachari, S. K. ; Chopra, I. ; Munos, B. ; Nathan, C. ; Outterson, K. ; Paccaud, J. P. ; Payne, D. J. ; Peeling, R. W. ; Structural Genomics Consortium, ; et al., (2011) Towards new business models for R&D for novel antibiotics Drug Resistance Updates, 14 (2). pp. 88-94. ISSN 1368-7646

Periwal, Vinita ; Rajappan, Jinuraj K. ; Jaleel, Abdul U. C. ; Scaria, Vinod ; Open Source Drug Discovery Consortium, (2011) Predictive models for anti-tubercular molecules using machine learning on high-throughput biological screening datasets BMC Research Notes, 4 (1). p. 504. ISSN 1756-0500

Anand, Praveen ; Sankaran, Sandhya ; Mukherjee, Sumanta ; Yeturu, Kalidas ; Laskowski, Roman ; Bhardwaj, Anshu ; Bhagavat, Raghu ; Brahmachari, Samir K. ; Chandra, Nagasuma ; et, al. (2011) Structural annotation of Mycobacterium tuberculosis proteome PLoS One, 6 (10). e27044. ISSN 1932-6203

Bousquet, Jean ; Anto, Josep M. ; Sterk, Peter J. ; Adcock, Ian M. ; Chung, Kian ; Roca, Josep ; Agusti, Alvar ; Brightling, Chris ; Cambon-Thomsen, Anne ; Brahmachari, S. K. ; et al., (2011) Systems medicine and integrated care to combat chronic noncommunicable diseases Genome Medicine, 3 (7). p. 43. ISSN 1756-994X

Sengupta, Mainak ; Chakraborty, Amrita ; Ray, Kunal ; Indian Genome Variation Consortium, (2010) Analysis of single nucleotide polymorphisms of PRNP gene in twenty-four ethnic groups of India Journal of Genetics, 89 (2). pp. 247-251. ISSN 0022-1333

Grover, Sandeep ; Gourie-Devi, Mandaville ; Baghel, Ruchi ; Sharma, Sangeeta ; Bala, Kiran ; Gupta, Meena ; Narayanasamy, Krishnamoorthy ; Varma, Binuja ; Gupta, Meenal ; Brahmachari, Samir K. ; Indian Genome Variation Consortium, (2010) Genetic profile of patients with epilepsy on first-line antiepileptic drugs and potential directions for personalized treatment Pharmacogenomics, 11 (7). pp. 927-941. ISSN 1462-2416

Biswas, Arindam ; Sadhukhan, Tamal ; Majumder, Sayantani ; Misra, Amar K. ; Ray, Kunal ; Das, Shyamal K. ; Ray, Jharna ; Indian Genome, Variation Consortium (2010) Evaluation of PINK1 variants in Indian Parkinson's disease patients Parkinsonism & Related Disorders, 16 (3). pp. 167-171. ISSN 1353-8020

Aggarwal, S. ; Negi, S. ; Jha, P. ; Singh, P. K. ; Stobdan, T. ; Pasha, M. A. Q. ; Ghosh, S. ; Agrawal, A. ; Prasher, B. ; Brahmachari, S. K. ; Indian Genome Variation Consortium, (2010) EGLN1 involvement in high-altitude adaptation revealed through genetic analysis of extreme constitution types defined in Ayurveda Proceedings of the National Academy of Sciences, 107 (44). pp. 18961-18966. ISSN 0027-8424

Narang, Ankita ; Roy, Rishi Das ; Chaurasia, Amit ; Mukhopadhyay, Arijit ; Mukerji, Mitali ; Indian Genome Variation Consortium, ; Dash, Debasis (2010) IGVBrowser–a genomic variation resource from diverse Indian populations Database, 2010 . baq022. ISSN 1758-0463

Abdulla, M. A. ; Ahmed, I. ; Assawamakin, A. ; Bhak, J. ; Brahmachari, S. K. ; Calacal, G. C. ; Chaurasia, A. ; Chen, C.-H. ; Chen, J. ; Chen, Y.-T. ; et al., ; The HUGO Pan-Asian SNP Consortium, (2009) Mapping human genetic diversity in Asia Science, 326 (5959). pp. 1541-1545. ISSN 0036-8075

Kumar, Jitender ; Garg, Gaurav ; Kumar, Arun ; Sundaramoorthy, Elayanambi ; Sanapala, Krishna Rao ; Karthikeyan, Ganesan ; Ghosh, Saurabh ; Ramakrishnan, Lakshmy ; Indian Genome Variation Consortium, ; Sengupta, Shantanu (2009) Single nucleotide polymorphisms in homocysteine metabolism pathway genes: association of CHDH A119C and MTHFR C677T with hyperhomocysteinemia Circulation: Cardiovascular Genetics, 2 (6). pp. 599-606. ISSN 1942-325X

Soni, Kartik ; Ahluwalia, Jasmine K. ; Khan, Sohrab ; Pillai, Beena ; Mitra, Debashis ; Brahmachari, Samir K. (2009) Human miRNAs: an antiviral defense mechanism Retrovirology, 6 (Suppl ). P83. ISSN 1742-4690

Bhardwaj, Anshu ; Bhartiya, Deeksha ; Kumar, Nitin ; Open Source Drug Discovery Consortium, ; Scaria, Vinod (2009) TBrowse: an integrative genomics map of Mycobacterium tuberculosis Tuberculosis, 89 (5). pp. 386-387. ISSN 1472-9792

Hariharan, Manoj ; Scaria, Vinod ; Brahmachari, Samir K. (2009) dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated regulation BMC Bioinformatics, 10 . 108_1-108_6. ISSN 1471-2105

Sharma, Amit ; Kumar, Manish ; Aich, Jyotirmoi ; Hariharan, Manoj ; Brahmachari, Samir K. ; Agrawal, Anurag ; Ghosh, Balaram (2009) Posttranscriptional regulation of interleukin-10 expression by hsa-miR-106a PNAS, 106 (14). pp. 5761-5766. ISSN 0027-8424

Sinha, Swapnil ; Arya, Vandana ; Agarwal, Sarita ; Habib, Saman ; Indian Genome Variation Consortium, (2009) Genetic differentiation of populations residing in areas of high malaria endemicity in India Journal of Genetics, 88 (1). pp. 77-80. ISSN 0022-1333

Bahl, Samira ; Ahmed, Ikhlak ; Mukerji, Mitali ; Indian Genome, Variation Consortium (2009) Utilizing linkage disequilibrium information from Indian genome variation database for mapping mutations: SCA₁₂ case study Journal of Genetics, 88 (1). pp. 55-60. ISSN 0022-1333

Gupta, Meenal ; Bhatnagar, Pallav ; Grover, Sandeep ; Kaur, Harpreet ; Baghel, Ruchi ; Bhasin, Yasha ; Chauhan, Chitra ; Verma, Binuja ; Manduva, Vallikiran ; Mukherjee, Odity ; Purushottam, Meera ; Sharma, Abhay ; Jain, Sanjeev ; Brahmachari, Samir K. ; Kukreti, Ritushree (2009) Association studies of catechol-O-methyltransferase (COMT) gene with schizophrenia and response to antipsychotic treatment Pharmacogenomics, 10 (3). pp. 385-397. ISSN 1462-2416

Taneja, Bhupesh ; Yadav, Jyoti ; Chakraborty, Tushar K. ; Brahmachari, Samir K. (2009) An Indian effort towards affordable drugs: "generic to designer drugs" Biotechnology Journal, 4 (3). pp. 348-360. ISSN 1860-6768

Gupta, Meenal ; Chauhan, Chitra ; Bhatnagar, Pallav ; Gupta, Simone ; Grover, Sandeep ; Singh, Prashant K. ; Purushottam, Meera ; Mukherjee, Odity ; Jain, Sanjeev ; Brahmachari, Samir K. ; Kukreti, Ritushree (2009) Genetic susceptibility to schizophrenia: role of dopaminergic pathway gene polymorphisms Pharmacogenomics, 10 (2). pp. 277-291. ISSN 1462-2416

Thorisson, Gudmundur A. ; Lancaster, Owen ; Free, Robert C. ; Hastings, Robert K. ; Sarmah, Pallavi ; Dash, Debasis ; Brahmachari, Samir K. ; Brookes, Anthony J. (2009) HGVbaseG2P: a central genetic association database Nucleic Acids Research, 37 (1). D797-D802. ISSN 0305-1048

Ahluwalia, Jasmine K. ; Khan, Sohrab Zafar ; Soni, Kartik ; Rawat, Pratima ; Gupta, Ankit ; Hariharan, Manoj ; Scaria, Vinod ; Lalwani, Mukesh ; Pillai, Beena ; Mitra, Debashis ; Brahmachari, Samir K. (2008) Human cellular microRNA hsa-miR-29a interferes with viral nef protein expression and HIV-1 replication Retrovirology, 5 (117). pp. 1-10. ISSN 1742-4690

Hardy, Billie-Jo ; Séguin, Béatrice ; Singer, Peter A. ; Mukerji, Mitali ; Brahmachari, Samir K. ; Daar, Abdallah S. (2008) From diversity to delivery: the case of the Indian Genome Variation initiative Nature Reviews Genetics, 9 (Suppl. 1). S9-S14. ISSN 1471-0056

Sundaramoorthy, Elayanambi ; Maiti, Souvik ; Brahmachari, Samir K. ; Sengupta, Shantanu (2008) Predicting protein homocysteinylation targets based on dihedral strain energy and pKa of cysteines Proteins: Structure, Function, and Bioinformatics, 71 (3). pp. 1475-1483. ISSN 0887-3585

Brahmachari, Samir K. ; Majumder, Partha ; Mukerji, Mitali ; Habib, Saman ; Dash, Debasis ; Ray, Kunal ; Bahl, Samira ; Batra, Jyotsna ; et al., ; Indian Genome Variation Consortium, (2008) Genetic landscape of the people of India: a canvas for disease gene exploration Journal of Genetics, 87 (1). pp. 3-20. ISSN 0022-1333

Anbazhagan, Padmanabhan ; Purushottam, Meera ; Kiran Kumar, H. B. ; Kubendran, Shobana ; Mukherjee, Odity ; Brahmachari, Samir Kumar ; Jain, Sanjeev ; Sowdhamini, Ramanathan (2008) Evolutionary analysis of PHLPP1 gene in humans and non-human primates Bioinformation, 2 (10). pp. 471-474. ISSN 0973-2063

Mathivanan, Suresh ; Ahmed, Mukhtar ; Ahn, Natalie G. ; Alexandre, Hainard ; Amanchy, Ramars ; Andrews, Philip C. ; Bader, Joel S. ; Balgley, Brian M. ; Bantscheff, Marcus ; Brahmachari, Samir K. ; et al., (2008) Human proteinpedia enables sharing of human protein data Nature Biotechnology, 26 (2). pp. 164-167. ISSN 1087-0156

Bhattacharjee, Ashima ; Banerjee, Deblina ; Mookherjee, Suddhasil ; Acharya, Moulinath ; Banerjee, Antara ; Ray, Ananya ; Sen, Abhijit ; Ray, Kunal ; Consortium, Indian Genome Variation (2008) Leu432Val polymorphism in CYP1B1 as a susceptible factor towards predisposition to primary open-angle glaucoma Molecular Vision, 14 . pp. 841-850. ISSN 1090-0535

Sinha, Swapnil ; Mishra, Shrawan K. ; Sharma, Shweta ; Patibandla, Phani K. ; Mallick, Prashant K. ; Sharma, Surya K. ; Mohanty, Sanjib ; Pati, Sudhanshu S. ; Mishra, Saroj K. ; Ramteke, Bheshaj K. ; Indian Genome, Variation Consortium ; et, al. (2008) Polymorphisms of TNF-enhancer and gene for FcgammaRIIa correlate with the severity of falciparum malaria in the ethnically diverse Indian population Malaria Journal, 7 (1). p. 13. ISSN 1475-2875

Sinha, Swapnil ; Qidwai, Tabish ; Kanchan, Kanika ; Anand, Prerna ; Jha, Ganga N. ; Pati, Sudhanshu S. ; Mohanty, Sanjib ; Mishra, Saroj K. ; Tyagi, Prajesh K. ; Sharma, Surya K. ; Indian Genome Variation Consortium, ; et, al. (2008) Variations in host genes encoding adhesion molecules and susceptibility to falciparum malaria in India Malaria Journal, 7 (1). p. 250. ISSN 1475-2875

Prasher, Bhavana ; Negi, Sapna ; Aggarwal, Shilpi ; Mandal, Amit K. ; Sethi, Tav P. ; Deshmukh, Shailaja R. ; Purohit, Sudha G. ; Sengupta, Shantanu ; Khanna, Sangeeta ; Mohammad, Farhan ; Garg, Gaurav ; Brahmachari, Samir K. ; Mukerji, Mitali (2008) Whole genome expression and biochemical correlates of extreme constitutional types defined in Ayurveda Journal of Translational Medicine, 6 . 48_1-48_12. ISSN 1479-5876

Saha, A. ; Mukherjee, S. ; Maulik, M. ; Chandak, G. R. ; Ray, K. ; Indian Genome Variation Consortium, (2007) Evaluation of genetic markers linked to hemophilia a locus: an Indian experience Haematologica, 92 (12). 1725-1726 . ISSN 1466-4860

Scaria, Vinod ; Hariharan, Manoj ; Pillai, Beena ; Maiti, Souvik ; Brahmachari, Samir K. (2007) Host-virus genome interactions: macro roles for microRNAs Cellular Microbiology, 9 (12). pp. 2784-2794. ISSN 1462-5814

Prakash, Tulika ; Sandhu, Kuljeet Singh ; Singh, Nitin Kumar ; Bhasin, Yasha ; Ramakrishnan, C. ; Brahmachari, Samir K. (2007) Structural assessment of glycyl mutations in invariantly conserved motifs Proteins: Structure, Function, and Bioinformatics, 69 (3). pp. 617-632. ISSN 0887-3585

Biswas, A. ; Maulik, M. ; Das, S. K. ; Ray, K. ; Ray, J. (2007) Parkin polymorphisms: risk for Parkinson’s disease in Indian population Clinical Genetics, 72 (5). pp. 484-486. ISSN 0009-9163

Kumar , H. B. Kiran ; Purushottam, Meera ; Kubendran, Shobana ; Gayathri, Praveena ; Mukherjee, Odity ; Murthy , A. Ram ; Ghosh, Saurabh ; Chandra, Prabha ; Reddy , Y. C. Janardhan ; Benegal, Vivek ; Brahmachari, Samir Kumar ; Jain, Sanjeev (2007) Serotonergic candidate genes and puerperal psychosis: an association study Psychiatric Genetics, 17 (5). pp. 253-260. ISSN 0955-8829

Sharma, Vineet K. ; Kumar, Naveen ; Brahmachari, Samir K. ; Ramachandran, Srinivasan (2007) Abundance of dinucleotide repeats and gene expression are inversely correlated: a role for gene function in addition to intron length Physiological Genomics, 31 (1). pp. 96-103. ISSN 1094-8341

Gupta, Arnab ; Maulik, Mahua ; Nasipuri, Poonam ; Chattopadhyay, Ishita ; Das, Shyamal K. ; Gangopadhyay, Prasanta K. ; Ray, Kunal ; Indian Genome Variation Consortium, (2007) Molecular diagnosis of wilson disease using prevalent mutations and informative single-nucleotide polymorphism markers Clinical Chemistry, 53 (9). 1601-1608 . ISSN 0009-9147

Scaria, Vinod ; Hariharan, Manoj ; Brahmachari, Samir K. ; Maiti, Souvik ; Pillai, Beena (2007) microRNA: an emerging therapeutic ChemMedChem, 2 (6). pp. 789-792. ISSN 1860-7179

Mahajan, Anubha ; Chavali, Sreenivas ; Ghosh, Saurabh ; Kabra, Madhulika ; Chowdhury, Madhumita Roy ; Bharadwaj, Dwaipayan (2007) Allelic heterogeneity of molecular events in human coagulation factor IX in Asian Indians Human Mutation, 28 (5). p. 526. ISSN 1059-7794

Ganapathi, Mythily ; Singh, Gajinder Pal ; Sandhu, Kuljeet Singh ; Brahmachari, Samir Kumar ; Brahmachari, Vani (2007) A whole genome analysis of 5' regulatory regions of human genes for putative cis-acting modulators of nucleosome positioning Gene, 391 (1-2). pp. 242-251. ISSN 0378-1119

Gupta, Simone ; Bisht, Siddharth S. ; Kukreti, Ritushree ; Jain, Sanjeev ; Brahmachari, Samir K. (2007) Boolean network analysis of a neurotransmitter signaling pathway Journal of Theoretical Biology, 244 (3). pp. 463-469. ISSN 0022-5193

Brahmachari, Samir K. (2007) Keynote functional genomics and DNA chips Applied Biochemistry and Biotechnology, 96 (1-3). pp. 9-12. ISSN 0273-2289

Ghosh, Tanay ; Pandey, Neeraj ; Maitra, Arindam ; Brahmachari, Samir K. ; Pillai, Beena (2007) A role for voltage-dependent anion channel Vdac1 in polyglutamine-mediated neuronal cell death PLoS ONE, 2 (11). e1170_1-e1170_10. ISSN 1932-6203

Mukherjee, O. ; Meera, P. ; Ghosh, S. ; Kubendran, S. ; Kiran, K. ; Manjunath, K. R. ; Subhash, M. N. ; Benegal, V. ; Brahmachari, S. K. ; Majumder, P. P. ; Jain, S. (2006) Evidence of linkage and association on 18p11.2 for psychosis American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, 141B (8). pp. 868-873. ISSN 0148-7299

Romero Guzmàn, M. ; Liquier, J. ; Brahmachari, S. K. ; Taillandier, E. (2006) Characterization of parallel and antiparallel G-tetraplex structures by vibrational spectroscopy Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 64 (2). pp. 495-503. ISSN 1386-1425

Kukreti, Ritushree ; Tripathi, Sudipta ; Bhatnagar, Pallav ; Gupta, Simone ; Chauhan, Chitra ; Kubendran, Shobhana ; Reddy, Y. C. Janardhan ; Jain, Sanjeev ; Brahmachari, Samir K. (2006) Association of DRD2 gene variant with schizophrenia Neuroscience Letters, 392 (1-2). pp. 68-71. ISSN 0304-3940

Gupta, Simone ; Jain, Sanjeev ; Brahmachari, Samir K. ; Kukreti, Ritushree (2006) Pharmacogenomics: a path to predictive medicine for schizophrenia Pharmacogenomics, 7 (1). pp. 31-47. ISSN 1462-2416

Sharma, Vineet K. ; Sharma, Anu ; Kumar, Naveen ; Khandelwal, Mamta ; Mandapati, Kiran Kumar ; Horn-Saban, Shirley ; Strichman-Almashanu, Liora ; Lancet, Doron ; Brahmachari, Samir K. ; Ramachandran, Srinivasan (2006) Expoldb: expression linked polymorphism database with inbuilt tools for analysis of expression and simple repeats BMC Genomics, 7 (258). No pp. given. ISSN 1471-2164

Scaria, Vinod ; Hariharan, Manoj ; Maiti, Souvik ; Pillai, Beena ; Brahmachari, Samir K. (2006) Host-virus interaction: a new role for microRNAs Retrovirology, 3 . 68_1-68_9. ISSN 1742-4690

Hariharan, Manoj ; Scaria, Vinod ; Pillai, Beena ; Brahmachari, Samir K. (2005) Targets for human encoded microRNAs in HIV genes Biochemical and Biophysical Research Communications, 337 (4). pp. 1214-1218. ISSN 0006-291X

Verma, Ranjana ; Mukerji, Mitali ; Grover, Deepak ; B-Rao, Chandrika ; Das, Swapan Kumar ; Kubendran, Shobana ; Jain, Sanjeev ; Brahmachari, Samir K. (2005) MLC1 gene is associated with schizophrenia and bipolar disorder in southern india Biological Psychiatry, 58 (1). pp. 16-22. ISSN 0006-3223

Kukreti, Ritushree ; Bhatnagar, Pallav ; B-Rao, Chandrika ; Gupta, Simone ; Madan, Babita ; Das, Chinmoyee ; Guleria, Randeep ; Athavale, Amita Umesh ; Brahmachari, Samir Kumar ; Ghosh, Balaram (2005) β₂-adrenergic receptor polymorphisms and response to salbutamol among Indian asthmatics Pharmacogenomics, 6 (4). pp. 399-410. ISSN 1462-2416

Sharma, Anu ; Sharma, Vineet K. ; Horn-Saban, Shirley ; Lancet, Doron ; Ramachandran, Srinivasan ; Brahmachari, Samir K. (2005) Assessing natural variations in gene expression in humans by comparing with monozygotic twins using microarrays Physiological Genomics, 21 (1). pp. 117-123. ISSN 1094-8341

Padiath, Quasar Saleem ; Srivastava, Achal Kumar ; Roy, Sanghmitra ; Jain, Satish ; Brahmachari, Samir Kumar (2005) Identification of a novel 45 repeat unstable allele associated with a disease phenotype at the MJD1/SCA3 locus American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, 133B (1). pp. 124-126. ISSN 0148-7299

Prakash, Tulika ; Ramakrishnan, C. ; Dash, Debasis ; Brahmachari, Samir K. (2005) Conformational analysis of invariant peptide sequences in bacterial genomes Journal of Molecular Biology, 345 (5). pp. 937-955. ISSN 0022-2836

Grover, Deepak ; Kannan, K. ; Brahmachari, Samir K. ; Mukerji, Mitali (2005) ALU-ring elements in the primate genomes Genetica, 124 (2-3). pp. 273-289. ISSN 0016-6707

Ganapathi, Mythily ; Srivastava, Pragya ; Sutar, Sushanta Kumar Das ; Kumar, Kaushal ; Dasgupta, Dipayan ; Singh, Gajinder Pal ; Brahmachari, Vani ; Brahmachari, Samir K. (2005) Comparative analysis of chromatin landscape in regulatory regions of human housekeeping and tissue specific genes BMC Bioinformatics, 6 . p. 126. ISSN 1471-2105

Verma, Ranjana ; Kubendran, Shobana ; Das, Swapan Kumar ; Jain, Sanjeev ; Brahmachari, Samir K. (2005) SYNGR1 is associated with schizophrenia and bipolar disorder in southern India Journal of Human Genetics, 50 (12). pp. 635-640. ISSN 1434-5161

Sharma, Vineet K. ; Brahmachari, Samir K. ; Ramachandran, Srinivasan (2005) (TG/CA)_n repeats in human gene families: abundance and selective patterns of distribution according to function and gene length BMC Genomics, 6 . 83_1-83_12. ISSN 1471-2164

Prakash, Tulika ; Khandelwal, Mamta ; Dasgupta, Dipayan ; Dash, Debasis ; Brahmachari, Samir K. (2004) CoPS: comprehensive peptide signature database Bioinformatics, 20 (16). pp. 2886-2888. ISSN 1367-4803

Sharma, Ramakant ; Maheshwari, Jitendra Kumar ; Prakash, Tulika ; Dash, Debasis ; Brahmachari, Samir K. (2004) Recognition and analysis of protein-coding genes in severe acute respiratory syndrome associated coronavirus Bioinformatics, 20 (7). pp. 1074-1080. ISSN 1367-4803

Verma, Ranjana ; Chauhan, Chitra ; Saleem, Quasar ; Gandhi, Charu ; Jain, Sanjeev ; Brahmachari, Samir K. (2004) A nonsense mutation in the synaptogyrin 1 gene in a family with schizophrenia Biological Psychiatry, 55 (2). pp. 196-199. ISSN 0006-3223

Grover, Deepak ; Mukerji, Mitali ; Bhatnagar, Pankaj ; Kannan, K. ; Brahmachari, Samir K. (2004) Alu repeat analysis in the complete human genome: trends and variations with respect to genomic composition Bioinformatics, 20 (6). pp. 813-817. ISSN 1367-4803

Nandi, Tannistha ; Brahmachari, Samir K. ; Kannan, Krishnamoorthy ; Ramachandran, Srinivasan (2004) Clusters of proteins in archaeal and bacterial proteomes using compositional analysis In Silico Biology, 4 (4). pp. 573-591. ISSN 1386-6338

Shankar, Ravi ; Grover, Deepak ; Brahmachari, Samir K. ; Mukerji, Mitali (2004) Evolution and distribution of RNA polymerase II regulatory sites from RNA polymerase III dependant mobile Alu elements BMC Evolutionary Biology, 4 (37). No pp. given. ISSN 1471-2148

Saleem, Q. ; Roy, S. ; Murgood, U. ; Saxena, R. ; Verma, I. C. ; Anand, A. ; Muthane, U. ; Jain, S. ; Brahmachari, S. K. (2003) Molecular analysis of Huntington's disease and linked polymorphisms in the Indian population Acta Neurologica Scandinavica, 108 (4). pp. 281-286. ISSN 0001-6314

Sen, Somdutta ; Dash, Debasis ; Pasha, Santosh ; Brahmachari, Samir K. (2003) Role of histidine interruption in mitigating the pathological effects of long polyglutamine stretches in SCA1: a molecular approach Protein Science, 12 (5). pp. 953-962. ISSN 0961-8368

Sharma, Vineet K. ; Rao, Chandrika B. ; Sharma, Anu ; Brahmachari, Samir K. ; Ramachandran, Srinivasan (2003) (TG/CA)_n repeats in human housekeeping genes Journal of Biomolecular Structure and Dynamics, 21 (2). pp. 303-310. ISSN 0739-1102

Nandi, Tannistha ; Dash, Debasis ; Ghai, Rohit ; Rao, Chandrika B. ; Kannan, K. ; Brahmachari, Samir K. ; Ramakrishnan, C. ; Ramachandran, Srinivasan (2003) A novel complexity measure for comparative analysis of protein sequences from complete genomes Journal of Biomolecular Structure & Dynamics, 205 (5). pp. 657-668. ISSN 0739-1102

Qadar Pasha, M. A. ; Kocherlakota, K. S. ; Khan, A. P. ; Norboo, T. ; Grover, S. K. ; Baig, M. A. ; Selvamurthy, W. ; Bramhachari, S. K. (2003) Arterial oxygen saturation under hypoxic environment of high-altitude associates with routine physical activities of natives Current science, 85 (4). pp. 502-506. ISSN 0011-3891

Kumar, Ratan ; Qadar Pasha, M. A. ; Khan, Amjad P. ; Gupta, V. ; Grover, S. K. ; Norboo, T. ; Srivastava, K. K. ; Selvamurthy, W. ; Brahamchari, S. K. (2003) Association of high-altitude systemic hypertension with the deletion allele-of the angiotensin-converting enzyme (ACE) gene International Journal of Biometeorology, 48 (1). pp. 10-14. ISSN 0020-7128

Kaushik, Mahima ; Kukreti, Ritushree ; Grover, Deepak ; Brahmachari, Samir K. ; Kukreti, Shrikant (2003) Hairpin-duplex equilibrium reflected in the A→B transition in an undecamer quasi-palindrome present in the locus control region of the human β-globin gene cluster Nucleic Acids Research, 31 (23). pp. 6904-6915. ISSN 0305-1048

Grover, Deepak ; Majumder, Partha P. ; Rao, Chandrika B. ; Brahmachari, Samir K. ; Mukerji, Mitali (2003) Nonrandom distribution of Alu elements in genes of various functional categories: insight from analysis of human chromosomes 21 and 22 Molecular Biology and Evolution, 20 (9). pp. 1420-1424. ISSN 0737-4038

Pillai, Beena ; Verma, Jiyoti ; Abraham, Anju ; Francis, Princy ; Kumar, Yadunanda ; Tatu, Utpal ; Brahmachari, Samir K. ; Sadhale, Parag P. (2002) Whole genome expression profiles of yeast RNA polymerase II core subunit, Rpb4, in stress and nonstress conditions Journal of Biological Chemistry, 278 . pp. 3339-3346. ISSN 0021-9258

Saleem, Quasar ; Muthane, Uday ; Verma, Inder C. ; Brahmachari, Samir K. ; Jain, Sanjeev (2002) Expanding colonies and expanding repeats Lancet, 359 (9309). pp. 895-896. ISSN 0099-5355

Qadar Pasha, M. A. ; Khan, Amjad P. ; Kumar, Ratan ; Ram, Rekh B. ; Grover, Surinder K. ; Srivastava, Kaushal K. ; Selvamurthy, William ; Brahmachari, Samir K. (2002) Variations in angiotensin-converting enzyme gene insertion/deletion polymorphism in Indian populations of different ethnic origins Journal of Biosciences, 27 (1). pp. 67-70. ISSN 0250-5991

Kukreti, Ritushree ; B-Rao, Chandrika ; Das, Swapan Kr ; De, Madhusnata ; Talukder, Geeta ; Vaz, Flavian ; Verma, I. C. ; Brahmachari, Samir K. (2002) Study of the single nucleotide polymorphism (SNP) at the palindromic sequence of hypersensitive site (HS)4 of the human β-globin locus control region (LCR) in Indian population American Journal of Hematology, 69 (1). pp. 77-79. ISSN 0361-8609

Mukherjee, O. ; Saleem, Q. ; Purushottam, M. ; Anand, A. ; Brahmachari, S. K. ; Jain, S. (2002) Common psychiatric diseases and human genetic variation Community Genetics, 5 (3). pp. 171-177. ISSN 1422-2795

Srivastava, Achal K. ; Choudhry, Shweta ; Gopinath, Musuwadi S. ; Roy, Sanghamitra ; Tripathi, Manjari ; Brahmachari, Samir K. ; Jain, Satish (2001) Molecular and clinical correlation in five Indian families with spinocerebellar ataxia 12 Annals of Neurology, 50 (6). pp. 769-800. ISSN 0364-5134

Qadar Pasha, M. A. ; Khan, A. P. ; Kumar, R. ; Grover, S. K. ; Ram, R. B. ; Norboo, T. ; Srivastava, K. K. ; Selvamurthy, W. ; Bramhachari, S. K. (2001) Angiotensin converting enzyme insertion allele in relation to high altitude adaptation Annals of Human Genetics, 65 (6). pp. 531-536. ISSN 0003-4800

Saleem, Q. ; Dash, D. ; Gandhi, C. ; Kishore, A. ; Benegal, V. ; Sherrin, T. ; Mukherjee, O. ; Jain, S. ; Brahmachari, S. K. (2001) Association of CAG repeat loci on chromosome 22 with schizophrenia and bipolar disorder Molecular Psychiatry, 6 (6). pp. 694-700. ISSN 1359-4184

Pataskar, Shashank S. ; Dash, Debasis ; Brahmachari, Samir K. (2001) Intramolecular i-motif structure at acidic pH for progressive myoclonus epilepsy (EPM1) repeat d(CCCCGCCCCGCG)n Journal of Biomolecular Structure & Dynamics, 19 (2). pp. 307-314. ISSN 0739-1102

Murgod, Uday A. ; Saleem, Quasar ; Anand, A. ; Brahmachari, S. K. ; Jain, Sanjeev ; Muthane, Uday B. (2001) A clinical study of patients with genetically confirmed Huntington's disease from India Journal of the Neurological Sciences, 190 (1-2). pp. 73-78. ISSN 0022-510X

Pillai, Beena ; Brahmachari, Samir K. ; Sadhale, Parag P. (2001) Genome-wide expression profile of RNA polymerase II subunit mutant of yeast using microarray technology Current Science, 81 (5). pp. 574-578. ISSN 0011-3891

Choudhry, Shweta ; Mukerji, Mitali ; Srivastava, Achal K. ; Jain, Satish ; Brahmachari, Samir K. (2001) CAG repeat instability at SCA2 locus: anchoring CAA interruptions and linked single nucleotide polymorphisms Human Molecular Genetics, 10 (21). pp. 2437-2446. ISSN 0964-6906

Maiti, Amit K. ; Brahmachari, Samir K. (2001) Poly purine.pyrimidine sequences upstream of the beta-galactosidase gene affect gene expression in Saccharomyces cerevisiae BMC Molecular Biology, 2 . 11_1-11_7. ISSN 1471-2199

Brahmachari, Samir K. ; Dash, Debasis ; Pataskar, Shashank S. (2001) Progressive myoclonus epilepsy [EPM1] repeat d(CCCCGCCCCGCG)_n forms folded hairpin structures at physiological pH Journal of Biomolecular Structure and Dynamics, 19 (2). pp. 293-305. ISSN 0739-1102

Saleem, Quasar ; Anand, Anuranjan ; Jain, Sanjeev ; Brahmachari, Samir K. (2001) The polyglutamine motif is highly conserved at the Clock locus in various organisms and is not polymorphic in humans Human Genetics, 109 (2). pp. 136-142. ISSN 0340-6717

Saleem, Quasar ; Sreevidya, V. S. ; Sudhir, J. ; Vijaya Savithri, J. ; Gowda, Y. ; Rao, Chandrika B. ; Benegal, V. ; Majumder, Partha P. ; Anand, Anuranjan ; Brahmachari, Samir K. ; Jain, Sanjeev (2000) Association analysis of CAG repeats at the KCNN3 locus in Indian patients with bipolar disorder and schizophrenia American Journal of Medical Genetics, 96 (6). pp. 744-748. ISSN 0148-7299

Chakrabarti, Bhismadev ; Brahmachari, Samir K. (2000) DNA chip the what's, the why's and the how's Resonance - Journal of Science Education, 5 (12). pp. 34-40. ISSN 0971-8044

Brahmachari, Samir K. ; Sharma, Deepak ; Sharma, Sunitha ; Pasha, Santosh ; Sen, Somdatta ; Saleem, Quasar (2000) Probing the polyglutamine puzzle in neurological disorders FEBS Letters, 472 (1). pp. 167-168. ISSN 0014-5793

Saleem, Q. ; Ganesh, S. ; Vijaykumar, M. ; Reddy, Y. C. J. ; Brahmachari, S. K. ; Jain, Sanjeev (2000) Association analysis of 5HT transporter gene in bipolar disorder in the Indian population American Journal of Medical Genetics, 96 (2). pp. 170-172. ISSN 0148-7299

Brahmachari, Samir K. ; Raghavan, Sowmya ; Hariharan, Ramesh (2000) Polypurine.polypyrimidine sequences in complete bacterial genomes: preference for polypurines in protein-coding regions Gene, 242 (1-2). pp. 275-283. ISSN 0378-1119

Saleem, Q. ; Choudhry, S. ; Mukerji, M. ; Bashyam, L. ; Padma, M. V. ; Chakravarthy, A. ; Maheshwari, M. C. ; Jain, S. ; Brahmachari, S. K. (2000) Molecular analysis of autosomal dominant hereditary ataxias in the Indian population: high frequency of SCA2 and evidence for a common founder mutation Human Genetics, 106 (2). pp. 179-187. ISSN 0340-6717

Ramachandran, Srinivasan ; Dash, Debasis ; Brahmachari, Samir K. (1999) The multitude of 'omics' and 'omes': evolution of scientific terms in molecular biology in the new millennium Current Science, 77 (7). p. 846. ISSN 0011-3891

Brahmachari, Samir K. ; Sharma, Deepak ; Sharma, Sunita ; Pasha, Santosh (1999) Peptide models for inherited neurodegenerative disorders: conformation and aggregation properties of long polyglutamine peptides with and without interruptions FEBS Letters, 456 (1). pp. 181-185. ISSN 0014-5793

Saleem, Quasar ; Vijayakumar, M. ; Mutsuddi, Mousumi ; Chowdhary, Neerja ; Jain, Sanjeev ; Brahmachari, Samir K. (1998) Variation at the MJD locus in the major psychoses American Journal of Medical Genetics, 81 (5). pp. 440-442. ISSN 0148-7299

Sivaramjani, T. R. ; Brahmachari, Samir K. (1997) Human genome studies and intellectual property rights: Whither national interest? Current Science, 72 (10). pp. 708-716. ISSN 0011-3891

Brahmachari, Samir K. ; Sarkar, Partha S. ; Raghavan, Sowmya ; Narayan, Malathy ; Maiti, Amit K. (1997) Polypurine/polypyrimidine sequences as cis-acting transcriptional regulators Gene, 190 (1). pp. 17-26. ISSN 0378-1119

Raghavan, Sowmya ; Burma, Pradeep K. ; Brahmachari, Samir K. (1997) Positional preferences of polypurine/polypyrimidine tracts in saccharomyces cerevisiae genome: implications for cis regulation of gene expression Journal of Molecular Evolution, 45 (5). pp. 485-498. ISSN 0022-2844

Bhandari, Rashna ; Brahmachari, Samir K. (1995) Analysis of CAG/CTG triplet repeats in the human genome: implication in transcription factor gene regulation Journal of Biosciences, 20 (5). pp. 613-627. ISSN 0250-5991

Balagurumoorthy, P. ; Brahmachari, S. K. (1995) Intra- and interloop interactions in the folded G quartet structure of oxytricha telomeric sequence Indian Journal of Biochemistry & Biophysics, 32 (6). pp. 385-390. ISSN 0301-1208

Brahmachari, Samir K. ; Meera, Gopinath ; Sarkar, Partha S. ; Balagurumoorthy, Pichumani ; Tripathi, Jalaj ; Raghavan, Sowmya ; Shaligram, Umesh ; Pataskar, Shashank (1995) Simple repetitive sequences in the genome: structure and functional significance Electrophoresis, 16 (1). pp. 1705-1714. ISSN 0173-0835

Balagurumoorthy, P. ; Brahmachari, S. K. (1994) Structure and stability of human telomeric sequence Journal of Biological Chemistry, 269 (34). pp. 21858-21869. ISSN 0021-9258

Nagaich, A. K. ; Bhattacharyya, D. ; Brahmachari, S. K. ; Bansal, M. (1994) CA/TG sequence at the 5'end of oligo(A)-tracts strongly modulates DNA curvature Journal of Biological Chemistry, 269 (10). pp. 7824-7833. ISSN 0021-9258.

Bagga, R. ; Brahmachari, S. K. (1993) Polypurine-polypyrimidine sequences adopt unwound structure in pBR322 form V DNA as probed by single-hit analysis of HpaII sites Journal of Biomolecular Structure & Dynamics, 10 (5). pp. 879-890. ISSN 0739-1102

Burma, Pradeep Kumar ; Raj, Alok ; Deb, Jayant K. ; Brahmachari, Samir K. (1992) Genome analysis: a new approach for visualization of sequence organization in genomes Journal of Biosciences, 17 (4). pp. 395-411. ISSN 0250-5991

Balagurumoorthy, P. ; Brahmachari, Samir K. ; Mohanty, Debasisa ; Bansal, Manju ; Sasisekharan, V. (1992) Hairpin and parallel quartet structures for telomeric sequences Nucleic Acids Research, 20 (15). pp. 4061-4067. ISSN 0305-1048

Sarkar, Partha S. ; Brahmachari, Samir K. (1992) Intramolecular triplex potential sequence within a gene down regulates its expression in vivo Nucleic Acids Research, 20 (21). pp. 5713-5718. ISSN 0305-1048

Sarkar, Parthas S. ; Bagga, Rajesh ; Balagurumoorthy, P. ; Bramachari, Samir K. (1991) A novel approach to design of cis-acting DNA structural element for regulation of gene expression in vivo Current Science, 60 (8). pp. 586-591. ISSN 0011-3891

Ramesh, N. ; Mishra, Rakesh K. (1991) Screening of clones containing altered DNA conformations by plasmid topoprofile shift Journal of Biochemical and Biophysical Methods, 22 (2). pp. 171-175. ISSN 0165-022X

Tripathi, Jalaj ; Brahmachari, Samir K. (1991) Distribution of simple repetitive (TG/CA)n and (CT/AG)n sequences in human and rodent genomes Journal of Biomolecular Structure and Dynamics, 9 (2). pp. 387-397. ISSN 0739-1102

Brahmachari, S. K. ; Balagurumoorthy, P. ; Burma, P. K. ; Bagga , R. ; Sarkar, P. S. (1991) Synthetic gene design to investigate the role of cis-acting DNA structural elements in regulation of gene expression in vivo Nucleic Acids Symposium Series, 24 . pp. 163-166. ISSN 0261-3166

Shouche, Yogesh S. ; Ramesh, N. ; Brahmachari, Samir K. (1990) Probing of unusual DNA structures in topologically constrained form V DNA: use of restriction enzymes as structural probe Nucleic Acids Research, 18 (2). pp. 267-275. ISSN 0305-1048

Bagga, Rajesh ; Ramesh, N. ; Brahmachari, Samir K. (1990) Supercoil-induced unusual DNA structures as transcriptional block Nucleic Acids Research, 18 (11). pp. 3363-3369. ISSN 0305-1048

Brahmachari, Vani ; Nagasuma, R. ; Brahmachari, Samir K. (1989) Preparation of megabase DNA from adult insects and mammalian spleen for pulsed-field gel electrophoresis Journal of Genetics, 68 (3). pp. 185-188. ISSN 0022-1333

Meera, G. ; Ramesh, N. ; Brahmachari, Samir K. (1989) Zintrons in rat α-lactalbumin gene FEBS Letters, 251 (1-2). pp. 245-249. ISSN 0014-5793

Majumder, K. ; Brahmachari, S. K. (1989) Sequence specificity in spermine-induced structural changes in CG-oligomers Biochemistry International, 18 (2). pp. 455-465. ISSN 0158-5231

Majumder, K. ; Mishra, R. K. ; Bansal, M. ; Brahmachari, S. K. (1989) Sequence criteria for Z-DNA formation: studies on poly d(ACGT) Nucleic Acids Research, 17 (1). p. 450. ISSN 0305-1048

Brahmachari, Samir K. ; Mishra, Rakesh K. ; Bagga, Rajesh ; Ramesh, N. (1989) DNA duplex with the potential to change handedness after every half a turn Nucleic Acids Research, 17 (18). pp. 7273-7281. ISSN 0305-1048

Rao, Ekambareswara K. ; Ramesh, N. ; Choudhury, D. ; Brahmachari, S. K. ; Sasisekharan, V. (1989) Role of the environment in the interaction of nonintercalators with Z-DNA Journal of Biomolecular Structure and Dynamics, 7 (2). pp. 335-345. ISSN 0739-1102

Brahmachari, Samir K. ; Ramesh, N. (1989) Structural alteration from non-B to B-form could reflect DNase I hypersensitivity Journal of Biomolecular Structure and Dynamics, 6 (5). pp. 899-906. ISSN 0739-1102

Kadalayil, L. P. ; Mishra, R. K. ; Brahmachari, S. K. ; Majumder, K. (1988) Sequence specificity of Z-DNA formation in oligonucleotides Biochemistry International, 17 (1). pp. 121-131. ISSN 0158-5231

Brahmachari, S. K. ; Mishra, R. K. (1988) Synthesis of a novel polynucleotide: potential R-L model Current Science, 57 (11). p. 574. ISSN 0011-3891

Gourie-Devi, M. ; Chaudhuri, J. R. ; Vasanth, A. ; Saleem, Q. ; Mutsuddi, M. ; Gopinath, M. ; Sarkar, P. S. ; Brahmachari, S. K. (1988) Correlation of clinical profile of myotonic dystrophy with CTG repeats in the myotonin protein kinase gene Indian Journal of Medical Research, 107 . pp. 187-196. ISSN 0971-5916

Mishra, Rakesh K. ; Latha, P. K. ; Brahmachari, Samir K. (1988) Interruptions of (CG)_n sequences by GG, TG and CA need not prevent B to Z transition in solution Nucleic Acids Research, 16 (10). pp. 4651-4665. ISSN 0305-1048

Majumder, Kumud ; Kadalayil, Latha P. ; Brahmachari, S. K. (1987) Synthesis and purification of oligodeoxyribonucleotides: a modified approach Current Science, 56 (14). pp. 693-697. ISSN 0011-3891

Brahmachari, Samir K. ; Shouche, Y. S. ; Cantor, Charles R. ; McClelland, Michael (1987) Sequences that adopt non-B-DNA conformation in form V DNA as probed by enzymic methylation Journal of Molecular Biology, 193 (1). pp. 201-211. ISSN 0022-2836

Ramesh, N. ; Shouche, Yogesh S. ; Brahmachari, Samir K. (1986) Recognition of B and Z forms of DNA by Escherichia coli DNA polymerase I Journal of Molecular Biology, 190 (4). pp. 635-638. ISSN 0022-2836

Majumder, Kumud ; Brahmachari, Samir K. ; Sasisekharan, V. (1986) Sequence dependence and role of 5'-phosphate in the B to Z transition FEBS Letters, 198 (2). pp. 240-244. ISSN 0014-5793

Conrad, Michael ; Brahmachari, S. K. ; Sasisekharan, V. (1986) DNA structural variability as a factor in gene expression and evolution Biosystems, 19 (2). pp. 123-126. ISSN 0303-2647

Majumder, Kumud ; Latha, P. K. ; Brahmachari, Samir K. (1986) Use of a volatile buffer at ambient temperature: versatile approach to the purification of self-complementary synthetic deoxyoligonucleotides by reversed-phase high-performance liquid chromatography Journal of Chromatography A, 355 . pp. 328-334. ISSN 0021-9673

Brahmachari, S. K. ; Ramesh, N. ; Das, M. R. ; Parnaik, V. K. (1985) Poly (dG dC) in the Z-form inhibits E. coli DNA polymerase I and AMV DNA polymerase activity Biochemistry International, 11 (3). pp. 281-290. ISSN 0158-5231

Shouche, Y. S. ; Latha, P. K. ; Ramesh, N. ; Majumder, K. ; Mandyan, V. ; Brahmachari, Samir K. (1985) Left handed DNA in synthetic and topologically constrained form V DNA and its implications in protein recognition Journal of Biosciences, 8 (3-4). pp. 563-578. ISSN 0250-5991

Latha, P.K. ; Brahmachari, Samir K. (1985) A novel structural transition in poly(dG-Me⁵dC):ZBZ FEBS Letters, 182 (2). pp. 315-318. ISSN 0014-5793

Ananthanarayanan, V. S. ; Brahmachari, Samir K. ; Pattabiraman, N. (1984) Proline-containing β-turns in peptides and proteins: analysis of structural data on globular proteins Archives of Biochemistry and Biophysics, 232 (2). pp. 482-495. ISSN 0003-9861

Ramesh, N. ; Brahmachari, Samir K. (1983) Critical cation balance in B → Z transition: role of Li⁺ FEBS Letters, 164 (1). pp. 33-37. ISSN 0014-5793

Rao, B. J. ; Brahmachari, S. K. ; Rao, M. R. (1983) Structural organization of the meiotic prophase chromatin in the rat testis Journal of Biological Chemistry, 258 (22). pp. 13478-13485. ISSN 0021-9258

Latha, P. K. ; Majumder, Kumud ; Brahmachari, Samir K. (1983) Temperature dependent Z→B transitions in poly (dG-dC) Current Science, 52 (19). pp. 907-910. ISSN 0011-3891

Rajagopalan, Malini ; Brahmachari, Samir K. ; Sasisekharan, V. ; Srivastava, Rakesh (1983) X-ray diffraction studies on Mycobacterium smegmatis DNA Biopolymers, 22 (7). pp. 1633-1635. ISSN 0006-3525

Brahmachari, Samir K. ; Bhatnagar, Rajendra S. ; Ananthanarayanan, V. S. ; Rapaka, Rao S. (1982) Proline-containing β-turns in peptides and proteins. II. physicochemical studies on tripeptides with the Pro-Gly sequence Biopolymers, 21 (6). pp. 1107-1125. ISSN 0006-3525

Brahmachari, Samir K. ; Bhat, T. N. ; Sudhakar, V. ; Vijayan, M. ; Rapaka, R. S. ; Bhatnagar, R. S. ; Ananthanarayanan, V. S. (1981) beta.-Turn conformation of N-acetyl-L-prolylglycyl-L-phenylalanine. Crystal structure and solution studies Journal of the American Chemical Society, 103 (7). pp. 1703-1708. ISSN 0002-7863

Sasisekharan, V. ; Brahmachari, Samir K. (1981) B to Z transition in DNA fibre: the question of handedness of the duplex Current Science, 50 (1). pp. 10-13. ISSN 0011-3891

Brahms, S. ; Brahmachari, S. K. ; Angelier, N. ; Brahms, J. G. (1981) Conformation of DNA in chromatin reconstituted from poly [d(A-T)] and the core histones Nucleic Acids Research, 9 (19). pp. 4879-4893. ISSN 0305-1048

Couppez, M. ; Sautiere, P. ; Brahmachari, S. K. ; Brahms, J. ; Liquier, J. ; Taillandier, E. (1980) Site and role of the N-terminal fragment of the nucleosomal core histones in their binding to deoxyribonucleic acid as determined by vibrational spectroscopy Biochemistry, 19 (4). pp. 3358-3363. ISSN 0006-2960

Brahmachari, S. K. ; Ananthanarayanan, V. S. (1979) β-Turns in nascent procollagen are sites of posttranslational enzymatic hydroxylation of proline PNAS, 76 (10). pp. 5119-5123. ISSN 0027-8424

Brahmachari, Samir K. ; Ananthanarayanan, V. S. ; Brahms, S. ; Brahms, J. ; Rapaka, Rao S. ; Bhatnagar, Rajendra S. (1979) Vacuum ultraviolet circular dichroism spectrum of β-turn in solution Biochemical and Biophysical Research Communications, 86 (3). pp. 605-612. ISSN 0006-291X

Bansal, Manju ; Brahmachari, Samir K. ; Sasisekharan, V. (1979) Structural investigations on poly(4-hydroxy-L-proline). 1. Theoretical studies Macromolecules, 12 (1). pp. 19-23. ISSN 0024-9297

Brahmachari, Samir K. ; Bansal, Manju ; Ananthanarayanan, V. S. ; Sasisekharan, V. (1979) Structural investigations on poly(4-hydroxy-L-proline). 2. Physicochemical studies Macromolecules, 12 (1). pp. 23-28. ISSN 0024-9297

Brahmachari, Samir K. ; Ananthanarayanan, V. S. ; Rapaka, Rao S. ; Bhatnagar, Rajendra S. (1978) Polypeptide models of Collagen. II. Solution properties of (Pro-Gly-Phe)_n Biopolymers, 17 (9). pp. 2097-2105. ISSN 0006-3525

Brahmachari, Samir K. ; Ananthanarayanan, V. S. (1978) Conformational criteria for the enzymatic hydroxylation of proline in collagen Current Science, 47 . pp. 107-108. ISSN 0011-3891

Ananthanarayanan, V. S. ; Brahmachari, Samir K. ; Rapaka, Rao S. ; Bhatnagar, Rajendra S. (1976) Polypeptide models of collagen. Solution properties of (Gly-Pro-Sar)_n and (Gly-Sar-Pro)_n Biopolymers, 15 (4). pp. 707-716. ISSN 0006-3525