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Tripathi, Aarti ; Banerjee, Arup ; Vrati, Sudhanshu (2021) Development and characterization of an animal model of Japanese encephalitis virus infection in adolescent C57BL/6 mouse Disease Models & Mechanisms, 14 (10). ISSN 1754-8403

Sehrawat, Sapna ; Khasa, Renu ; Deb, Arundhati ; Prajapat, Surendra Kumar ; Mallick, Suvadip ; Basu, Anirban ; Surjit, Milan ; Kalia, Manjula ; Vrati, Sudhanshu ; Heise, Mark T. (2021) Valosin-Containing Protein/p97 Plays Critical Roles in the Japanese Encephalitis Virus Life Cycle Journal of Virology, 95 (11). ISSN 0022-538X

Banerjee, Atoshi ; Tripathi, Aarti ; Duggal, Shweta ; Banerjee, Arup ; Vrati, Sudhanshu (2020) Dengue virus infection impedes megakaryopoiesis in MEG-01 cells where the virus envelope protein interacts with the transcription factor TAL-1 Scientific Reports, 10 (1). ISSN 2045-2322

Saini, Jaya ; Bandyopadhyay, Bhaswati ; Pandey, Abhay Deep ; Ramachandran, V. G. ; Das, Shukla ; Sood, Vikas ; Banerjee, Arup ; Vrati, Sudhanshu ; Knipe, David M. (2020) High-Throughput RNA Sequencing Analysis of Plasma Samples Reveals Circulating microRNA Signatures with Biomarker Potential in Dengue Disease Progression mSystems, 5 (5). ISSN 2379-5077

Levine, Myron M ; Abdullah, Salim ; Arabi, Yaseen M ; Darko, Delese Mimi ; Durbin, Anna P ; Estrada, Vicente ; Jamrozik, Euzebiusz ; Kremsner, Peter G ; Lagos, Rosanna ; Pitisuttithum, Punnee ; Plotkin, Stanley A ; Sauerwein, Robert ; Shi, Sheng-Li ; Sommerfelt, Halvor ; Subbarao, Kanta ; Treanor, John J ; Vrati, Sudhanshu ; King, Deborah ; Balasingam, Shobana ; Weller, Charlie ; Aguilar, Anastazia Older ; Cassetti, M Cristina ; Krause, Philip R ; Restrepo, Ana Maria Henao (2020) Viewpoint of a WHO Advisory Group Tasked to Consider Establishing a Closely-monitored Challenge Model of Coronavirus Disease 2019 (COVID-19) in Healthy Volunteers Clinical Infectious Diseases, 72 (11). pp. 2035-2041. ISSN 1058-4838

Mukherjee, Sriparna ; Akbar, Irshad ; Kumari, Bharti ; Vrati, Sudhanshu ; Basu, Anirban ; Banerjee, Arup (2019) Japanese Encephalitis Virus‐induced let‐7a/b interacted with the NOTCH ‐ TLR 7 pathway in microglia and facilitated neuronal death via caspase activation Journal of Neurochemistry, 149 (4). pp. 518-534. ISSN 0022-3042

Goswami, Saptamita ; Banerjee, Atoshi ; Kumari, Bharti ; Bandopadhyay, Bhaswati ; Bhattacharya, Nemai ; Basu, Nandita ; Vrati, Sudhanshu ; Banerjee, Arup (2017) Differential Expression and Significance of Circulating microRNAs in Cerebrospinal Fluid of Acute Encephalitis Patients Infected with Japanese Encephalitis Virus Molecular Neurobiology, 54 (2). pp. 1541-1551. ISSN 0893-7648

Nain, Minu ; Mukherjee, Sriparna ; Karmakar, Sonali Porey ; Paton, Adrienne W. ; Paton, James C. ; Abdin, M. Z. ; Basu, Anirban ; Kalia, Manjula ; Vrati, Sudhanshu ; Diamond, Michael S. (2017) GRP78 Is an Important Host Factor for Japanese Encephalitis Virus Entry and Replication in Mammalian Cells Journal of Virology, 91 (6). ISSN 0022-538X

Sharma, Manish ; Bhattacharyya, Sankar ; Sharma, Kiran Bala ; Chauhan, Shailendra ; Asthana, Suramya ; Abdin, Malik Zainul ; Vrati, Sudhanshu ; Kalia, Manjula (2017) Japanese encephalitis virus activates autophagy through XBP1 and ATF6 ER stress sensors in neuronal cells Journal of General Virology, 98 (5). pp. 1027-1039. ISSN 0022-1317

Kumari, Bharti ; Jain, Pratistha ; Das, Shaoli ; Ghosal, Suman ; Hazra, Bibhabasu ; Trivedi, Ashish Chandra ; Basu, Anirban ; Chakrabarti, Jayprokas ; Vrati, Sudhanshu ; Banerjee, Arup (2016) Dynamic changes in global microRNAome and transcriptome reveal complex miRNA-mRNA regulated host response to Japanese Encephalitis Virus in microglial cells Scientific Reports, 6 (1). ISSN 2045-2322

Sharma, Deepak ; Priyadarshini, Pragya ; Vrati, Sudhanshu ; Goff, S. P. (2015) Unraveling the Web of Viroinformatics: Computational Tools and Databases in Virus Research Journal of Virology, 89 (3). pp. 1489-1501. ISSN 0022-538X

Zhou, Xi ; Bhullar, Deepika ; Jalodia, Richa ; Kalia, Manjula ; Vrati, Sudhanshu (2014) Cytoplasmic Translocation of Polypyrimidine Tract-Binding Protein and Its Binding to Viral RNA during Japanese Encephalitis Virus Infection Inhibits Virus Replication PLoS One, 9 (12). e114931. ISSN 1932-6203

Bhandari, Nita ; Rongsen-Chandola, Temsunaro ; Bavdekar, Ashish ; John, Jacob ; Antony, Kalpana ; Taneja, Sunita ; Goyal, Nidhi ; Kawade, Anand ; Kang, Gagandeep ; Rathore, Sudeep Singh ; Juvekar, Sanjay ; Muliyil, Jayaprakash ; Arya, Alok ; Shaikh, Hanif ; Abraham, Vinod ; Vrati, Sudhanshu ; Proschan, Michael ; Kohberger, Robert ; Thiry, Georges ; Glass, Roger ; Greenberg, Harry B ; Curlin, George ; Mohan, Krishna ; Harshavardhan, G V J A ; Prasad, Sai ; Rao, T S ; Boslego, John ; Bhan, Maharaj Kishan (2014) Efficacy of a monovalent human-bovine (116E) rotavirus vaccine in Indian infants: a randomised, double-blind, placebo-controlled trial The Lancet, 383 (9935). pp. 2136-2143. ISSN 0140-6736

Sharma, Manish ; Bhattacharyya, Sankar ; Nain, Minu ; Kaur, Manpreet ; Sood, Vikas ; Gupta, Vishal ; Khasa, Renu ; Abdin, Malik Z ; Vrati, Sudhanshu ; Kalia, Manjula (2014) Japanese encephalitis virus replication is negatively regulated by autophagy and occurs on LC3-I- and EDEM1-containing membranes Autophagy, 10 (9). pp. 1637-1651. ISSN 1554-8627

Bhattacharyya, Sankar ; Sen, Utsav ; Vrati, Sudhanshu (2014) Regulated IRE1-dependent decay pathway is activated during Japanese encephalitis virus-induced unfolded protein response and benefits viral replication Journal of General Virology, 95 (1). pp. 71-79. ISSN 0022-1317

Appaiahgari, Mohan Babu ; Glass, Roger ; Singh, Shakti ; Taneja, Sunita ; Rongsen-Chandola, Temsunaro ; Bhandari, Nita ; Mishra, Sukhdev ; Vrati, Sudhanshu (2014) Transplacental rotavirus IgG interferes with immune response to live oral rotavirus vaccine ORV-116E in Indian infants Vaccine, 32 (6). pp. 651-656. ISSN 0264-410X

Pareek, Siddhika ; Roy, Saugata ; Kumari, Bharti ; Jain, Pratistha ; Banerjee, Arup ; Vrati, Sudhanshu (2014) miR-155 induction in microglial cells suppresses Japanese encephalitis virus replication and negatively modulates innate immune responses Journal of Neuroinflammation, 11 (1). ISSN 1742-2094

Kalia, Manjula ; Khasa, Renu ; Sharma, Manish ; Nain, Minu ; Vrati, Sudhanshu (2013) Japanese Encephalitis Virus Infects Neuronal Cells through a Clathrin-Independent Endocytic Mechanism Journal of Virology, 87 (1). pp. 148-162. ISSN 0022-538X

Appaiahgari, Mohan Babu ; Vrati, Sudhanshu (2012) Clinical development of IMOJEV®—a recombinant Japanese encephalitis chimeric vaccine (JE-CV) Expert Opinion on Biological Therapy, 12 (9). pp. 1251-1263. ISSN 1471-2598

Anantpadma, M. ; Vrati, S. (2012) siRNA-mediated suppression of Japanese encephalitis virus replication in cultured cells and mice Journal of Antimicrobial Chemotherapy, 67 (2). pp. 444-451. ISSN 0305-7453

Vashist, Surender ; Bhullar, Deepika ; Vrati, Sudhanshu (2011) La protein can simultaneously bind to both 3'- and 5'-noncoding regions of Japanese encephalitis virus genome DNA and Cell Biology, 30 (6). pp. 339-346. ISSN 1044-5498

Appaiahgari, Mohan Babu ; Vrati, Sudhanshu (2010) IMOJEV^®: a yellow fever virus-based novel Japanese encephalitis vaccine Expert Review of Vaccines, 9 (12). pp. 1371-1384. ISSN 1476-0584

Dutta, Kallol ; Rangarajan, Pundi N. ; Vrati, Sudhanshu ; Basu, Anirban (2010) Japanese encephalitis: pathogenesis, prophylactics and therapeutics Current Science, 98 (3). pp. 326-334. ISSN 0011-3891

Anantpadma, Manu ; Stein, David A. ; Vrati, Sudhanshu (2010) Inhibition of Japanese encephalitis virus replication in cultured cells and mice by a peptide-conjugated morpholino oligomer Journal of Antimicrobial Chemotherapy, 65 (5). pp. 953-961. ISSN 0305-7453

Appaiahgari, Mohan Babu ; Abdin, M. Z. ; Bansal, K. C. ; Vrati, Sudhanshu (2009) Expression of Japanese encephalitis virus envelope protein in transgenic tobacco plants Journal of Virological Methods, 162 (1-2). pp. 22-29. ISSN 0166-0934

Vashist, Surender ; Anantpadma, Manu ; Sharma, Himani ; Vrati, Sudhanshu (2009) La protein binds the predicted loop structures in the 3' non-coding region of Japanese encephalitis virus genome: role in virus replication Journal of General Virology, 90 (6). pp. 1343-1352. ISSN 0022-1317

Choudhury, Sangeeta ; Kakkar, Varsha ; Suman, Pankaj ; Chakrabarti, Kausiki ; Vrati, Sudhanshu ; Gupta, Satish K. (2009) Immunogenicity of zona pellucida glycoprotein-3 and spermatozoa YLP peptides presented on Johnson grass mosaic virus-like particles Vaccine, 27 (22). pp. 2948-2953. ISSN 0264-410X

Bharati, Kaushik ; Rani, Rajni ; Vrati, Sudhanshu (2009) Evaluation of Japanese encephalitis virus DNA vaccine candidates in rhesus monkeys [Macaca mulatta] Vaccine, 27 (1). pp. 10-16. ISSN 0264-410X

Bhandari, Nita ; Sharma, Pooja ; Taneja, Sunita ; Kumar, Tivendra ; Rongsen-Chandola, Temsunaro ; Appaiahgari, Mohan Babu ; Mishra, Arpita ; Singh, Shakti ; Vrati, Sudhanshu (2009) A dose-escalation safety and immunogenicity study of live attenuated oral rotavirus vaccine 116E in infants: a randomized, double-blind, placebo-controlled trial The Journal of Infectious Diseases, 200 (3). pp. 421-429. ISSN 0022-1899

Appaiahgari, Mohan Babu ; Pandey, Ravindra Mohan ; Vrati, Sudhanshu (2007) Seroprevalence of neutralizing antibodies to adenovirus type 5 among children in India: implications for recombinant adenovirus-based vaccines Clinical and Vaccine Immunology, 14 (8). pp. 1053-1055. ISSN 1556-6811

Bhowmick, Sourojit ; Duseja, Rachna ; Das, Sulagna ; Appaiahgiri, Mohan Babu ; Vrati, Sudhanshu ; Basu, Anirban (2007) Induction of IP-10 (CXCL10) in astrocytes following Japanese encephalitis Neuroscience Letters, 414 (1). pp. 45-50. ISSN 0304-3940

Appaiahgari, Mohan Babu ; Vrati, Sudhanshu (2007) DNAzyme-mediated inhibition of Japanese encephalitis virus replication in mouse brain Molecular Therapy, 15 (9). pp. 1593-1599. ISSN 1525-0016

Alka, ; Bharati, Kaushik ; Malik, Y. P. S. ; Vrati, Sudhanshu (2007) Immunogenicity and protective efficacy of the E. coli-expressed domain III of Japanese encephalitis virus envelope protein in mice Medical Microbiology and Immunology, 196 (4). pp. 227-231. ISSN 0300-8584

Bharati, Kaushik ; Vrati, Sudhanshu (2006) Japanese encephalitis: development of new candidate vaccines Expert Review of Anti-infective Therapy, 4 (2). pp. 313-324. ISSN 1478-7210

Appaiahgari, Mohan Babu ; Saini, Manisha ; Rauthan, Manish ; Jyoti, ; Vrati, Sudhanshu (2006) Immunization with recombinant adenovirus synthesizing the secretory form of Japanese encephalitis virus envelope protein protects adenovirus-exposed mice against lethal encephalitis Microbes and Infection, 8 (1). pp. 92-104. ISSN 1286-4579

Bharati, Kaushik ; Appaiahgari Mohan, Babu ; Vrati, Sudhanshu (2005) Effect of Cytokine-encoding plasmid delivery on immune response to Japanese encephalitis virus DNA vaccine in mice Microbiology and Immunology, 49 (4). pp. 349-353. ISSN 0385-5600

Rauthan, Manish ; Kaur, Rupinderjeet ; Appaiahgari, Mohan Babu ; Vrati, Sudhanshu (2004) Oral immunization of mice with Japanese encephalitis virus envelope protein synthesized in Escherichia coli induces anti-viral antibodies Microbes and Infection, 6 (14). pp. 1305-1311. ISSN 1286-4579

Appaiahgari, Mohan Babu ; Vrati, Sudhanshu (2004) Immunogenicity and protective efficacy in mice of a formaldehyde-inactivated Indian strain of Japanese encephalitis virus grown in Vero cells Vaccine, 22 (27-28). pp. 3669-3675. ISSN 0264-410X

Kaur, Rupinderjeet ; Rauthan, Manish ; Vrati, Sudhanshu (2004) Immunogenicity in mice of a cationic microparticle-adsorbed plasmid DNA encoding Japanese encephalitis virus envelope protein Vaccine, 22 (21-22). pp. 2776-2782. ISSN 0264-410X

Viswanathan, Priya ; Venkaiah, Betapudi ; Kumar, M. Senthil ; Rasheedi, Sheeba ; Vrati, Sudhanshu ; Bashyam, Murali D. ; Hasnain, Seyed E. (2003) The homologous region sequence (hr1) of Autographa californica multinucleocapsid polyhedrosis virus can enhance transcription from non-baculoviral promoters in mammalian cells Journal of Biological Chemistry, 278 . pp. 52564-52571. ISSN 0021-9258

Rath, Archana ; Batra, Deepika ; Kaur, Rupinderjeet ; Vrati, Sudhanshu ; Gupta, Satish K. (2003) Characterization of immune response in mice to plasmid DNA encoding dog zona pellucida glycoprotein-3 Vaccine, 21 (17-18). pp. 1913-1923. ISSN 0264-410X

Saini, Manisha ; Vrati, Sudhanshu (2003) High-level synthesis of Johnson grass mosaic virus coat protein in Escherichia coli and its auto-assembly to form virus-like particles Protein Expression and Purification, 28 (1). pp. 86-92. ISSN 1046-5928

Saini, Manisha ; Vrati, Sudhanshu (2003) A Japanese encephalitis virus peptide present on Johnson grass mosaic virus-like particles induces virus-neutralizing antibodies and protects mice against lethal challenge Journal of Virology, 77 (6). pp. 3487-3494. ISSN 0022-538X

Kaur, Rupinderjeet ; Vrati, Sudhanshu (2003) Development of a recombinant vaccine against Japanese encephalitis Journal of NeuroVirology, 9 (4). pp. 421-431. ISSN 1355-0284

Kaur, Rupinderjeet ; Sachdevaa, Geetanjali ; Vrati, Sudhanshu (2002) Plasmid DNA immunization against Japanese encephalitis virus: immunogenicity of membrane-anchored and secretory envelope protein The Journal of Infectious Diseases, 185 (1). pp. 1-12. ISSN 0022-1899

Vrati, Sudhanshu (2000) Comparison of the genome sequences and the phylogenetic analyses of the GP78 and the Vellore P20778 isolates of Japanese encephalitis virus from India Journal of Biosciences, 25 (3). pp. 257-262. ISSN 0250-5991

Ta, Malancha ; Vrati, Sudhanshu (2000) Mov34 protein from mouse brain interacts with the 3' noncoding region of Japanese encephalitis virus Journal of Virology, 74 (11). pp. 5108-5115. ISSN 0022-538X

Vrati, S. ; Giri, R. K. ; Razdan, A. ; Malik, P. (1999) Complete nucleotide sequence of an Indian strain of Japanese encephalitis virus: sequence comparison with other strains and phylogenetic analysis The American Journal of Tropical Medicine and Hygiene, 61 (4). pp. 677-680. ISSN 0002-9637

Vrati, S. ; Agarwal, V. ; Malik, P. ; Wani, S. A. ; Saini, M. (1999) Molecular characterization of an Indian isolate of Japanese encephalitis virus that shows an extended lag phase during growth Journal of General Virology, 80 (7). pp. 1665-1671. ISSN 0022-1317

Rout, Pramod K. ; Vrati, Sudhanshu (1997) Oral immunization with recombinant vaccinia expressing cell-surface-anchored βhCG induces anti-hCG antibodies and T-cell proliferative response in rats Vaccine, 15 (14). pp. 1503-1505. ISSN 0264-410X

Talwar, G. P. ; Singh, Om ; Gupta, S. K. ; Hasnain, S. E. ; Pal, R. ; Majumdar, S. S. ; Vrati, S. ; Mukhopadhay, A. ; Srinivasan, J. ; Deshmukh, U. ; Ganga, S. ; Mandokhot, A. ; Gupta, A. (1997) The HSD-hCG vaccine prevents pregnancy in women: feasibility study of a reversible safe contraceptive vaccine American Journal of Reproductive Immunology, 37 (2). pp. 153-160. ISSN 8755-8920

Raikwar, Sudhanshu P. ; Malik, Poonam ; Singh, Om ; Vrati, Sudhanshu (1997) Recombinant adenovirus synthesizing cell surface-anchored βhCG induces bioneutralizing antibodies in rats Gene, 190 (1). pp. 197-202. ISSN 0378-1119

Vrati, Sudhanshu ; Macavoy, E. S. ; Xu, Z. Z. ; Smole, C. ; Boyle, D. B. ; Both, G. W. (1996) Construction and transfection of ovine adenovirus genomic clones to rescue modified viruses Virology, 220 (1). pp. 200-203. ISSN 0042-6822

Vrati, Sudhanshu ; Brookes, D. E. ; Strike, P. ; Khatri, A. ; Boyle, D. B. ; Both, G. W. (1996) Unique genome arrangement of an ovine adenovirus: identification of new proteins and proteinase cleavage sites Virology, 220 (1). pp. 186-199. ISSN 0042-6822

Vrati, S. ; Kerr, P. J. ; Weir, R. C. ; Dalgarno, L. (1996) Entry kinetics and mouse virulence of Ross River virus mutants altered in neutralization epitopes Journal of Virology, 70 (3). pp. 1745-1750. ISSN 0022-538X

Vrati, Sudhanshu ; Brookes, D. E. ; Boyle, D. B. ; Both, G. W. (1996) Nucleotide sequence of ovine adenovirus tripartite leader sequence and homologues of the IVa2, DNA polymerase and terminal proteins Gene, 177 (1-2). pp. 35-41. ISSN 0378-1119

Vrati, Sudhanshu ; Boyle, David ; Kocherhans, Rolf ; Both, Gerald W. (1995) Sequence of ovine adenovirus homologs for 100K hexon assembly, 33K, pVIII, and fiber genes: early region E3 is not in the expected location Virology, 209 (2). pp. 400-408. ISSN 0042-6822

Boyle, David B. ; Pye, Anthony D. ; Kocherhans, Rolf ; Adair, Brian M. ; Vrati, Sudhanshu ; Both, Gerald W. (1994) Characterisation of Australian ovine adenovirus isolates Veterinary Microbiology, 41 (3). pp. 281-291. ISSN 0378-1135

Vrati, S. ; Giri, D. K. ; Parida, S. K. ; Talwar, G. P. (1992) An epidemic of non-A, non-B hepatitis in South Delhi: epidemiological studies and transmission of the disease to rhesus monkeys Archives of Virology, 125 (1-4). pp. 319-326. ISSN 0304-8608

Sharma, Madhav D. ; Maillard, Patrick ; Vrati, Sudhanshu ; Mukherjee, Rama ; Rajagopalan, M. S. ; Poynard, Thierry ; Talwar, Gurusaran P. ; Pillot, Jacques (1990) Serial passage of West-European sporadic non-A non-B hepatitis in rhesus monkeys by inoculation with fecal extracts Journal of Medical Virology, 30 (1). pp. 36-41. ISSN 0146-6615

Burness, A. T. H. ; Pardoe, I. ; Faragher, S. G. ; Vrati, S. ; Dalgarno, L. (1988) Genetic stability of Ross River virus during epidemic spread in nonimmune humans Virology, 167 (2). pp. 639-643. ISSN 0042-6822

Vrati, Sudhanshu ; Fernon, Carol A. ; Dalgarno, Lynn ; Weir, Ronald C. (1988) Location of a major antigenic site involved in Ross River virus neutralization Virology, 162 (2). pp. 346-353. ISSN 0042-6822

Vrati, S. ; Mann, D. A. ; Reed, K. C. (1987) Alkaline northern blots: transfer of RNA from agarose gels to Zeta-Probe membrane in dilute NaOH Molecular Biology Reports, 1 . pp. 1-4. ISSN 0301-4851

Vrati, Sudhanshu ; Faragher, S. G. ; Weir, R. C. ; Dalgarno, L. (1986) Ross River virus mutant with a deletion in the E2 gene: properties of the virion, virus-specific macromolecule synthesis, and attenuation of virulence for mice Virology, 151 (2). pp. 222-232. ISSN 0042-6822

Vrati, Sudhanshu (1984) Single cell protein production by photosynthetic bacteria grown on the clarified effluents of biogas plant Applied Microbiology and Biotechnology, 19 (3). pp. 199-202. ISSN 0175-7598

Vrati, Sudhanshu ; Verma, Jitendra (1983) Production of molecular hydrogen and single cell protein by rhodopseudomonas capsulata from cow dung Journal of Fermentation Technology, 61 (2). pp. 157-162. ISSN 0385-6380