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Singh, Harinder ; Chauhan, Jagat Singh ; Michael, M. ; Raghava, Gajendra P. S. ; Open Source Drug, Discovery Consortium (2011) ccPDB: compilation and creation of data sets from protein data bank Nucleic Acids Research, 40 (D1). D486-D489. ISSN 0305-1048

Bhat, Aadil H. ; Mondal, Homchoru ; Chauhan, Jagat S. ; Raghava, Gajendra P. S. ; Methi, Amrish ; Rao, Alka (2011) ProGlycProt: a repository of experimentally characterized prokaryotic glycoproteins Nucleic Acids Research, 1 (40). pp. 1-6. ISSN 0305-1048

Tyagi, Atul ; Ahmed, Firoz ; Thakur, Nishant ; Sharma, Arun ; Raghava, Gajendra P. S. ; Kumar, Manoj (2011) HIVsirDB: a database of HIV inhibiting siRNAs PLos One, 6 (10). e25917_1-e25917_6. ISSN 1932-6203

Bhardwaj, Anshu ; Scaria, Vinod ; Raghava, Gajendra Pal Singh ; Lynnd, Andrew Michael ; Chandra, Nagasuma ; Banerjee, Sulagna ; Raghunandan, Muthukurussi V. ; Pandey, Vikas ; Taneja, Bhupesh ; Yadav, Jyoti ; Dash, Debasis ; Bhattacharya, Jaijit ; Misra, Amit ; Kumar, Anil ; Ramachandran, Srinivasan ; Thomas, Zakir ; Brahmachari, Samir K. (2011) Open source drug discovery - a new paradigm of collaborative research in tuberculosis drug development Tuberculosis, 91 (5). pp. 479-486. ISSN 1472-9792

Kumar, Ravi ; Panwar, Bharat ; Chauhan, Jagat S. ; Raghava, Gajendra P. S. (2011) Analysis and prediction of cancerlectins using evolutionary and domain information BMC Research Notes, 4 . p. 237. ISSN 1756-0500

Ahmed, Firoz ; Raghava, Gajendra P. S. (2011) Designing of highly effective complementary and mismatch siRNAs for silencing a gene PLos One, 6 (8). e23443_1-e23443_8. ISSN 1932-6203

Kumar, Manish ; Gromiha, M. Michael ; Raghava, Gajendra P. S. (2011) SVM based prediction of RNA-binding proteins using binding residues and evolutionary information Journal of Molecular Recognition, 24 (2). pp. 303-313. ISSN 0952-3499

Mishra, Nitish Kumar ; Raghava, Gajendra P. S. (2011) Prediction of specificity and cross-reactivity of kinase inhibitors Letters in Drug Design and Discovery, 8 (3). pp. 223-228. ISSN 1570-1808

Agarwal, Subhash M. ; Dhwani, Raghav ; Singh, Harinder ; Raghava, G. P. S. (2011) CCDB: a curated database of genes involved in cervix cancer Nucleic Acids Research, 39 (Suppl.). D975-D979. ISSN 0305-1048

Agarwal, Sandhya ; Kumar Mishra, Nitish ; Singh, Harinder ; Raghava, Gajendra P. S. (2011) Identification of mannose interacting residues using local composition PLos One, 6 (9). e24039_1-e24039_9. ISSN 1932-6203

Singla, Deepak ; Anurag, Meenakshi ; Dash, Debasis ; Raghava, Gajendra P. S. (2011) A web server for predicting inhibitors against bacterial target GlmU protein BMC Pharmacology, 11 (5). pp. 1-9. ISSN 1471-2210

Mamoon, Rashid ; Sumathy, Ramasamy ; Raghava, Gajendra P. S. (2010) A simple approach for predicting protein-protein interactions Current Protein & Peptide Science, 11 (7). pp. 589-600. ISSN 1389-2037

Ansari, Hifzur Rahman ; Raghava, Gajendra P. S. (2010) Identification of conformational B-cell epitopes in an antigen from its primary sequence Immunome Research, 6 . 6_1-6_9. ISSN 1745-7580

Panwar, Bharat ; Raghava, Gajendra P. S. (2010) Prediction and classification of aminoacyl tRNA synthetases using PROSITE domains BMC Genomics, 11 . 507_1-507_13. ISSN 1471-2164

Ansari, Hifzur R. ; Raghava, Gajendra P. S. (2010) Identification of NAD interacting residues in proteins BMC Bioinformatics, 11 . 160_1-160_. ISSN 1471-2105

Garg, Aarti ; Tewari, Rupinder ; Raghava, Gajendra P. S. (2010) KiDoQ: using docking based energy scores to develop ligand based model for predicting antibacterials BMC Bioinformatics, 11 . 125_1-125_13. ISSN 1471-2105

Singla, Deepak ; Sharma, Arun ; Kaur, Jasjit ; Panwar, Bharat ; Raghava, Gajendra P. S. (2010) BIAdb: a curated database of benzylisoquinoline alkaloids BMC Pharmacology, 10 . 4_1-4_8. ISSN 1471-2210

Mishra, Nitish K. ; Raghava, Gajendra P. S. (2010) Prediction of FAD interacting residues in a protein from its primary sequence using evolutionary information BMC Bioinformatics, 11 (Suppl.). 1_1-1_6. ISSN 1471-2105

Lata, Sneh ; Mishra, Nitish K. ; Raghava, Gajendra P. S. (2010) AntiBP2: improved version of antibacterial peptide prediction BMC Bioinformatics, 11 (S1). S19_1-S19_7. ISSN 1471-2105

Ansari, Hifzur Rahman ; Flower, Darren R. ; Raghava, G. P. S. (2010) AntigenDB: an immunoinformatics database of pathogen antigens Nucleic Acids Research, 38 (Suppl.). D847-D853. ISSN 0305-1048

Pashov, Anastas ; Monzavi-Karbassi, Bejatolah ; Raghava, Gajendra P. S. ; Kieber-Emmons, Thomas (2010) Bridging innate and adaptive antitumor immunity targeting glycans Journal of Biomedicine and Biotechnology, 2010 . pp. 1-19. ISSN 1110-7243

Lata, Sneh ; Raghava, G. P. S. (2010) Databases and web-based tools for innate immunity Bioinformatics, 3 . pp. 67-76. ISSN 1367-4803

Chauhan, Jagat S. ; Mishra, Nitish K. ; Raghava, Gajendra P. S. (2010) Prediction of GTP interacting residues, dipeptides and tripeptides in a protein from its evolutionary information BMC Bioinformatics, 11 . 301_1-301_9. ISSN 1471-2105

Mishra, Nitish K. ; Agarwal, Sandhya ; Raghava, Gajendra P. S. (2010) Prediction of cytochrome P450 isoform responsible for metabolizing a drug molecule BMC Pharmacology, 10 . 8_1-8_9. ISSN 1471-2210

Garg, Aarti ; Tewari, Rupinder ; Raghava, Gajendra P. S. (2010) Virtual screening of potential drug-like inhibitors against lysine/DAP pathway of Mycobacterium tuberculosis BMC Bioinformatics, 11 (S1). S53_1-S53_9. ISSN 1471-2105

Chauhan, Jagat S. ; Mishra, Nitish K. ; Raghava, Gajendra P. S. (2009) Identification of ATP binding residues of a protein from its primary sequence BMC Bioinformatics, 10 . 434_1-434_9. ISSN 1471-2105

Chaudhary, N. ; Mahajan, L. ; Madan, T. ; Kumar, A. ; Raghava, G. P. ; Katti, S. B. ; Haq, W. ; Sarma, P. U. (2009) Prophylactic and therapeutic potential of Asp f1 epitopes in naïve and sensitized BALB/c mice Immune Network, 9 (5). pp. 179-191. ISSN 1598-2629

Kaundal, Rakesh ; Raghava, Gajendra P. S. (2009) RSLpred: an integrative system for predicting subcellular localization of rice proteins combining compositional and evolutionary information Proteomics, 9 (9). pp. 2324-2342. ISSN 1615-9853

Arora, Pankaj K. ; Kumar, Manish ; Chauhan, Archana ; Raghava, Gajendra P. S. ; Jain, Rakesh K. (2009) OxDBase: a database of oxygenases involved in biodegradation BMC Research Notes, 2 . 67_1-67_8. ISSN 1756-0500

Lata, Sneh ; Bhasin, Manoj ; Raghava, Gajendra P. S. (2009) MHCBN 4.0: a database of MHC/TAP binding peptides and T-cell epitopes BMC Research Notes, 2 . 61_1-61_6. ISSN 1756-0500

Ahmed, Firoz ; Ansari, Hifzur Rahman ; Raghava, Gajendra P. S. (2009) Prediction of guide strand of microRNAs from its sequence and secondary structure BMC Bioinformatics, 10 . 105_1-105_12. ISSN 1471-2105

Kumar, Manish ; Raghava, Gajendra P. S. (2009) Prediction of nuclear proteins using SVM and HMM models BMC Bioinformatics, 10 . 22_1-22_10. ISSN 1471-2105

Rashid, Mamoon ; Singla, Deepak ; Sharma, Arun ; Kumar, Manish ; Raghava, Gajendra P. S. (2009) Hmrbase: a database of hormones and their receptors BMC Genomics, 10 (307). 307_1-307_10. ISSN 1471-2164

Lata, Sneh ; Raghava, G. P. S. (2009) Prediction and classification of chemokines and their receptors Protein Engineering, Design and Selection, 22 (7). pp. 441-444. ISSN 1741-0126

Verma, Ruchi ; Varshney, Grish C. ; Raghava, G. P. S. (2009) Prediction of mitochondrial proteins of malaria parasite using split amino acid composition and PSSM profile Amino Acids, 39 (1). pp. 101-110. ISSN 0939-4451

Ahmed, Firoz ; Kumar, Manish ; Raghava, Gajendra P. S. (2009) Prediction of polyadenylation signals in human DNA sequences using nucleotide frequencies In Silico Biology, 9 (3). pp. 135-148. ISSN 1386-6338

Garg, Aarti ; Raghava, Gajendra P. S. (2008) ESLpred2: improved method for predicting subcellular localization of eukaryotic proteins BMC Bioinformatics, 9 . 503_1-503_10. ISSN 1471-2105

Kumar, Manish ; Thakur, Varun ; Raghava, Gajendra P. S. (2008) COPid: composition based protein identification In Silico Biology, 8 (2). pp. 121-128. ISSN 1386-6338

Garg, Aarti ; Raghava, Gajendra P. S. (2008) A machine learning based method for the prediction of secretory proteins using amino acid composition,their order and similarity-search In Silico Biology, 8 (2). pp. 129-140. ISSN 1386-6338

Kalita, Mridul K. ; Nandal, Umesh K. ; Pattnaik, Ansuman ; Sivalingam, Anandhan ; Ramasamy, Gowthaman ; Kumar, Manish ; Raghava, Gajendra P. S. ; Gupta, Dinesh (2008) CyclinPred: a SVM-based method for predicting cyclin protein sequences PLos One, 3 (7). e2605_1-e2605_12. ISSN 1932-6203

Lata, Sneh ; Raghava, Gajendra P. S. (2008) PRRDB: a comprehensive database of pattern-recognition receptors and their ligands BMC Genomics, 9 . 180_1-180_6. ISSN 1471-2164

Verma, Ruchi ; Tiwari, Ajit ; Kaur, Sukhwinder ; Varshney, Grish C. ; Raghava, Gajendra P. S. (2008) Identification of proteins secreted by malaria parasite into erythrocyte using SVM and PSSM profiles BMC Bioinformatics, 9 . 201_1-201_11. ISSN 1471-2105

Kush, Amit ; Raghava, G. P. S. (2008) AC2DGel: analysis and comparison of 2D gels Journal of Proteomics & Bioinformatics, 1 (1). pp. 43-46. ISSN 0974-276X

Vivona, Sandro ; Gardy, Jennifer L. ; Ramachandran, Srinivasan ; Brinkman, Fiona S. L. ; Raghava, G. P. S. ; Flower, Darren R. ; Filippini, Francesco (2008) Computer-aided biotechnology: from immuno-informatics to reverse vaccinology Trends in Biotechnology, 26 (4). pp. 190-200. ISSN 0167-7799

Kumar, Manish ; Gromiha, Michael M. ; Raghava, G. P. S. (2008) Prediction of RNA binding sites in a protein using SVM and PSSM profile Proteins: Structure, Function, and Bioinformatics, 71 (1). pp. 189-194. ISSN 0887-3585

Lata, Sneh ; Raghava, G. P. S. (2008) CytoPred: a server for prediction and classification of cytokines Protein Engineering, Design and Selection, 21 (4). pp. 279-282. ISSN 1741-0126

Sethi, Deepti ; Garg, Aarti ; Raghava, G. P. S. (2008) DPROT: prediction of disordered proteins using evolutionary information Amino Acids, 35 (3). pp. 599-605. ISSN 0939-4451

Kumar, Manish ; Gromiha, Michael M. ; Raghava, Gajendra P. S. (2007) Identification of DNA-binding proteins using support vector machines and evolutionary profiles BMC Bioinformatics, 8 . 463_1-463_10. ISSN 1471-2105

Rashid, Mamoon ; Saha, Sudipto ; Raghava, Gajendra P. S. (2007) Support vector machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary information and motifs BMC Bioinformatics, 8 . 337_1-337_9. ISSN 1471-2105

Lata, Sneh ; Sharma, B. K. ; Raghava, G. P. S. (2007) Analysis and prediction of antibacterial peptides BMC Bioinformatics, 8 . 263_1-263_10. ISSN 1471-2105

Kaur, Harpreet ; Garg, Aarti ; Raghava, G. P. S. (2007) PEPstr: a de novo method for tertiary structure prediction of small bioactive peptides Protein and Peptide Letters, 14 (7). pp. 626-631. ISSN 0929-8665

Mishra, Nitish Kumar ; Kumar, Manish ; Raghava, G. P. S. (2007) Support vector machine based prediction of glutathione S-transferase proteins Protein and Peptide Letters, 14 (6). pp. 575-580. ISSN 0929-8665

Greenbaum, Jason A. ; Andersen, Pernille Haste ; Blythe, Martin ; Bui, Huynh-Hoa ; Cachau, Raul E. ; Crowe, James ; Davies, Matthew ; Kolaskar, A. S. ; Lund, Ole ; Morrison, Sherrie ; Mumey, Brendan ; Ofran, Yanay ; Pellequer, Jean-Luc ; Pinilla, Clemencia ; Ponomarenko, Julia V. ; Raghava, G. P. S. ; van Regenmortel, Marc H. V. ; Roggen, Erwin L. ; Sette, Alessandro ; Schlessinger, Avner ; Sollner, Johannes ; Zand, Martin ; Peters, Bjoern (2007) Towards a consensus on datasets and evaluation metrics for developing B-cell epitope prediction tools Journal of Molecular Recognition, 20 (2). pp. 75-82. ISSN 0952-3499

Bhasin, Manoj ; Raghava, G. P. S. (2007) A hybrid approach for predicting promiscuous MHC class I restricted T cell epitopes Journal of Biosciences, 32 (1). pp. 31-42. ISSN 0250-5991

Saha, Sudipto ; Raghava, Gajendra P. S. (2007) BTXpred: prediction of bacterial toxins In Silico Biology, 7 (4-5). pp. 405-412. ISSN 1386-6338.

Muthukrishnan, S. ; Garg, Aarti ; Raghava, G. P. S. (2007) Oxypred: prediction and classification of oxygen-binding proteins Genomics, Proteomics & Bioinformatics, 5 (3-4). pp. 250-252. ISSN 1672-0229

Anastas, Pashov ; Behjatolah, Monzavi Karbassi ; Gajendra, Raghava ; Thomas, Kieber-Emmons (2007) Peptide mimotopes as prototypic templates of broad-spectrum surrogates of carbohydrate antigens for cancer vaccination Critical Reviews in Immunology, 27 (3). pp. 247-270. ISSN 1040-8401

Saha, Sudipto ; Raghava, Gajendra P.S. (2007) Predicting virulence factors of immunological interest Methods in Molecular Biology, 409 (4). pp. 407-415. ISSN 1064-3745

Saha, Sudipto ; Raghava, Gajendra P. S. (2007) Prediction of neurotoxins based on their function and source In Silico Biology, 7 (4-5). pp. 369-387. ISSN 1386-6338

Srivastava, Shilpy ; Singh, Mahender Kumar ; Raghava, Gajendra P.S. ; Varshney, Grish C. (2007) Searching haptens, carrier proteins, and anti-hapten antibodies Methods in Molecular Biology, 409 (1). pp. 125-139. ISSN 1064-3745

Kaundal, Rakesh ; Kapoor, Amar S. ; Raghava, Gajendra P. S. (2006) Machine learning techniques in disease forecasting: a case study on rice blast prediction BMC Bioinformatics, 7 . 485_1-485_16. ISSN 1471-2105

Saha, Sudipto ; Raghava, G. P. S. (2006) Prediction of continuous B-cell epitopes in an antigen using recurrent neural network Proteins: Structure, Function, and Bioinformatics, 65 (1). pp. 40-48. ISSN 0887-3585

Raghava, G. P. S. ; Barton, Geoffrey J. (2006) Quantification of the variation in percentage identity for protein sequence alignments BMC Bioinformatics, 7 . 415_1-415_4. ISSN 1471-2105

Saha, Sudipto ; Raghava, G. P. S. (2006) AlgPred: prediction of allergenic proteins and mapping of IgE epitopes Nucleic Acids Research, 34 (Suppl.). W202-W209. ISSN 0305-1048

Kim, Jong Kyoung ; Raghava, G. P. S. ; Bang, Sung-Yang ; Choi, Seungjin (2006) Prediction of subcellular localization of proteins using pairwise sequence alignment and support vector machine Pattern Recognition Letters, 27 (9). pp. 996-1001. ISSN 0167-8655

Kumar, Manish ; Verma, Ruchi ; Raghava, Gajendra P. S. (2006) Prediction of mitochondrial proteins using support vector machine and hidden Markov model Journal of Biological Chemistry, 281 (9). pp. 5357-5363. ISSN 0021-9258

Singh, Mahender Kumar ; Srivastava, Shilpy ; Raghava, G. P. S. ; Varshney, Grish C. (2006) HaptenDB: a comprehensive database of haptens, carrier proteins and anti-hapten antibodies Bioinformatics, 22 (2). pp. 253-255. ISSN 1367-4803

Kaur, Harpreet ; Raghava, Gajendra Pal Singh (2006) Prediction of C^α-H···O and C^α-H···π interactions in proteins using recurrent neural network In Silico Biology, 6 (1-2). pp. 111-125. ISSN 1386-6338

Saha, Sudipto ; Zack, Jyoti ; Singh, Balvinder ; Raghava, G. P. S. (2006) VGIchan: prediction and classification of voltage-gated ion channels Genomics, Proteomics & Bioinformatics, 4 (4). pp. 253-258. ISSN 1672-0229

Saha, Sudipto ; Raghava, G. P. S. (2006) VICMpred: an SVM-based method for the prediction of functional proteins of gram-negative bacteria using amino acid patterns and composition Genomics, Proteomics & Bioinformatics, 4 (1). pp. 42-47. ISSN 1672-0229

Garg, Aarti ; Kaur, Harpreet ; Raghava, G. P. S. (2005) Real value prediction of solvent accessibility in proteins using multiple sequence alignment and secondary structure Proteins: Structure, Function, and Bioinformatics, 61 (2). pp. 318-324. ISSN 0887-3585

Saha, Sudipto ; Bhasin, Manoj ; Raghava, Gajendra P. S. (2005) Bcipep: a database of B-cell epitopes BMC Genomics, 6 (79). pp. 1-7. ISSN 1471-2164

Kumar, Manish ; Bhasin, Manoj ; Natt, Navjot K. ; Raghava, G. P. S. (2005) BhairPred: prediction of β-hairpins in a protein from multiple alignment information using ANN and SVM techniques Nucleic Acids Research, 33 (Suppl.). W154-W159. ISSN 0305-1048

Bhasin, Manoj ; Raghava, G. P. S. (2005) Pcleavage: an SVM based method for prediction of constitutive proteasome and immunoproteasome cleavage sites in antigenic sequences Nucleic Acids Research, 33 (Suppl.). W202-W207. ISSN 0305-1048

Garg, Aarti ; Bhasin, Manoj ; Raghava, Gajendra P. S. (2005) Support vector machine-based method for subcellular localization of human proteins using amino acid compositions, their order, and similarity search Journal of Biological Chemistry, 280 (15). pp. 14427-14432. ISSN 0021-9258

Raghava, Gajendra P. S. ; Han, Joon H. (2005) Correlation and prediction of gene expression level from amino acid and dipeptide composition of its protein BMC Bioinformatics, 6 . 59_1-59_14. ISSN 1471-2105

Bhasin, Manoj ; Garg, Aarti ; Raghava, G. P. S. (2005) PSLpred: prediction of subcellular localization of bacterial proteins Bioinformatics, 21 (10). pp. 2522-2524. ISSN 1367-4803

Bhasin, Manoj ; Raghava, G. P. S. (2004) GPCRsclass: a web tool for the classification of amine type of G-protein-coupled receptors Nucleic Acids Research, 33 (Suppl.). W143-W147. ISSN 0305-1048

Kaur, Harpreet ; Raghava, G. P. S. (2004) A neural network method for prediction of β-turn types in proteins using evolutionary information Bioinformatics, 20 (16). pp. 2751-2758. ISSN 1367-4803

Bhasin, Manoj ; Raghava, G. P. S. (2004) Prediction of CTL epitopes using QM, SVM and ANN techniques Vaccine, 22 (23-24). pp. 3195-3204. ISSN 0264-410X

Bhasin, Manoj ; Raghava, G. P. S. (2004) Prediction of promiscuous and high-affinity mutated MHC binders Hybridoma and Hybridomics, 22 (4). pp. 229-234. ISSN 1536-8599

Bhasin, Manoj ; Raghava, G. P. S. (2004) ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST Nucleic Acids Research, 32 (2). W414-W419. ISSN 0305-1048

Bhasin, Manoj ; Raghava, G. P. S. (2004) GPCRpred: an SVM-based method for prediction of families and subfamilies of G-protein coupled receptors Nucleic Acids Research, 32 (2). W383-W389. ISSN 0305-1048

Singh, Harpreet ; Raghava, G. P. S. (2004) Detection of orientation of MHC class II binding peptides using bioinformatics tools Biotech Software & Internet Report, 3 (5-6). pp. 146-150. ISSN 1527-9162

Natt, Navjyot K. ; Kaur, Harpreet ; Raghava, G. P. S. (2004) Prediction of transmembrane regions of β-barrel proteins using ANN- and SVM-based methods Proteins: Structure, Function, and Bioinformatics, 56 (1). pp. 11-18. ISSN 0887-3585

Sharma, Deepak ; Issac, Biju ; Raghava, G. P. S. ; Ramaswamy, R. (2004) Spectral repeat finder (SRF): identification of repetitive sequences using Fourier transformation Bioinformatics, 20 (9). pp. 1405-1412. ISSN 1367-4803

Bhasin, Manoj ; Raghava, Gajendra P. S. (2004) Classification of nuclear receptors based on amino acid composition and dipeptide composition Journal of Biological Chemistry, 279 (22). pp. 23262-23266. ISSN 0021-9258

Kaur, Harpreet ; Raghava, G. P. S. (2004) Role of evolutionary information in prediction of aromatic-backbone NH interactions in proteins FEBS Letters, 564 (1). pp. 47-57. ISSN 0014-5793

Kaur, Harpreet ; Raghava, G. P. S. (2004) Prediction of α-turns in proteins using PSI-BLAST profiles and secondary structure information Proteins: Structure, Function, and Genetics, 55 (1). pp. 83-90. ISSN 0887-3585

Bhasin, Manoj ; Raghava, G. P. S. (2004) Analysis and prediction of affinity of TAP binding peptides using cascade SVM Protein Science, 13 (3). pp. 596-607. ISSN 0961-8368

Bhasin, Manoj ; Raghava, G. P. S. (2004) SVM based method for predicting HLA-DRB1^∗0401 binding peptides in an antigen sequence Bioinformatics, 20 (3). pp. 421-423. ISSN 1367-4803

Saha, Sudipto ; Raghava, G. P. S. (2004) BcePred: prediction of continuous B-cell epitopes in antigenic sequences using physico-chemical properties Lecture Notes in Computer Science, 3239 . pp. 197-204. ISSN 0302-9743

Issac, Biju ; Raghava, Gajendra Pal Singh (2004) EGPred: prediction of eukaryotic genes using Ab initio methods after combining with sequence similarity approaches Genome Research, 14 . pp. 1756-1766. ISSN 1088-9051

Raghava, G. P. S. ; Searle, Stephen M. J. ; Audley, Patrick C. ; Barber, Jonathan D. ; Barton, Geoffrey J. (2003) OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy BMC Bioinformatics, 4 (47). pp. 1-23. ISSN 1471-2105

Sarin, Jyoti ; Raghava, Gajendra P. S. ; Chakraborti, Pradip K. (2003) Intrinsic contributions of polar amino acid residues toward thermal stability of an ABC-ATPase of mesophilic origin Protein Science, 12 (9). pp. 2118-2120. ISSN 0961-8368

Singh, Harpreet ; Raghava, G. P. S. (2003) ProPred1: prediction of promiscuous MHC class-I binding sites Bioinformatics, 19 (8). pp. 1009-1014. ISSN 1367-4803

Kaur, Harpreet ; Raghava, G. P. S. (2003) A neural-network based method for prediction of γ-turns in proteins from multiple sequence alignment Protein Science, 12 (5). pp. 923-929. ISSN 0961-8368

Bhasin, Manoj ; Singh, Harpreet ; Raghava, G. P. S. (2003) MHCBN: a comprehensive database of MHC binding and non-binding peptides Bioinformatics, 19 (5). pp. 665-666. ISSN 1367-4803

Kaur, Harpreet ; Raghava, G. P. S. (2003) Prediction of β-turns in proteins from multiple alignment using neural network Protein Science, 12 (3). pp. 627-634. ISSN 0961-8368

Kaur, Harpreet ; Raghava, G. P. S. (2003) BTEVAL: a server for evaluation of beta-turn prediction methods Journal of Bioinformatics and Computational Biology, 1 (3). pp. 495-504. ISSN 0219-7200

Issac, B. ; Raghava, G. P. S. (2002) GWFASTA: server for FASTA search in eukaryotic and microbial genomes Biotechniques, 33 (3). pp. 548-556. ISSN 0736-6205

Kaur, Harpreet ; Raghava, G. P. S. (2002) BetaTPred: prediction of β-TURNS in a protein using statistical algorithms Bioinformatics, 18 (3). pp. 498-499. ISSN 1367-4803

Issac, Biju ; Singh, Harpreet ; Kaur, Harpreet ; Raghava, G. P. S. (2002) Locating probable genes using Fourier transform approach Bioinformatics, 18 (1). pp. 196-197. ISSN 1367-4803

Kaur, Harpreet ; Raghava, G. P. S. (2002) An evaluation of β-turn prediction methods Bioinformatics, 18 (11). pp. 1508-1514. ISSN 1367-4803

Singh, Harpreet ; Raghava, G. P. S. (2001) ProPred: prediction of HLA-DR binding sites Bioinformatics, 17 (12). pp. 1236-1237. ISSN 1367-4803

Raghava , G. P. S. (2001) A graphical web server for the analysis of protein sequences and alignment Biotech Software & Internet Report, 2 (6). pp. 254-257. ISSN 1527-9162

Raghava, G. P. S. (2001) A web server for computing the size of DNA/protein fragments using a graphical method Biotech Software and Internet Report, 2 (5). pp. 198-200. ISSN 1527-9162

Raghava, G. P. S. ; Agrewala, Javed N. (2001) A web-based method for computing endpoint titer and concentration of antibody/antigen Biotech Software & Internet Report, 2 (5). pp. 196-197. ISSN 1527-9162

Raghava, G. P. S. (2001) PDWSB: Public Domain Web Servers in Biology Biotech Software and Internet Report, 2 (4). pp. 152-153. ISSN 1527-9162

Raghava, G. P. S. (2001) PDSB: Public Domain Software in Biology Biotech Software and Internet Report, 2 (4). pp. 154-156. ISSN 1527-9162

Raghava, Gajendra P. S. ; Solanki, Rajesh J. ; Soni, Vishal ; Agrawal, Pushpa (2000) Fingerprinting method for phylogenetic classification and identification of microorganisms based on variation in 16S rRNA gene sequences Biotechniques, 29 (1). pp. 108-115. ISSN 0736-6205

Nihalani, Deepak ; Raghava, G. P. S. ; Sahni, Girish (1997) Mapping of the plasminogen binding site of streptokinase with short synthetic peptides Protein Science, 6 (6). pp. 1284-1292. ISSN 0961-8368

Raghava, G. P. S. (1994) Improved estimation of DNA fragment length from gel electrophoresis data using a graphical method Biotechniques, 17 (1). pp. 100-104. ISSN 0736-6205

Raghava, G. P. S. ; Sahni, G. (1994) GMAP: a multi-purpose computer program to aid synthetic gene design, cassette mutagenesis and the introduction of potential restriction sites into DNA sequences Biotechniques, 16 (6). pp. 1116-1123. ISSN 0736-6205

Raghava, G. P. S. ; Agrewala, Javed N. (1994) Method for determining the affinity of monoclonal antibody using non-competitive ELISA: a computer program Journal of Immunoassay and Immunochemistry, 15 (2). pp. 115-128. ISSN 1532-1819

Raghava, G. P. S. ; Goel, A. ; Singh, A. M. ; Varshney, G. C. (1994) A simple microassay for computing the hemolytic potency of drugs Biotechniques, 17 (6). pp. 1148-1153. ISSN 0736-6205

Agrewala, Javed N. ; Raghava, G. P. S. ; Mishra, Gyan C. (1993) Measurement and computation of murine interleukin-4 and interferon-γ by exploiting the unique abilities of these lymphokines to induce the secretion of IgG1 and IgG2a Journal of Immunoassay, 14 (1-2). pp. 83-97. ISSN 0197-1522

Raghava, G. P. S. ; Joshi, A. K. ; Agrewala, J. N. (1992) Calculation of antibody and antigen concentrations from ELISA data using a graphical method Journal of Immunological Methods, 153 (1-2). pp. 263-264. ISSN 0022-1759