BTEVAL: a server for evaluation of beta-turn prediction methods

Kaur, Harpreet ; Raghava, G. P. S. (2003) BTEVAL: a server for evaluation of beta-turn prediction methods Journal of Bioinformatics and Computational Biology, 1 (3). pp. 495-504. ISSN 0219-7200

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Official URL: http://www.worldscinet.com/jbcb/01/0103/S021972000...

Related URL: http://dx.doi.org/10.1142/S0219720003000253

Abstract

This paper describes a web server BTEVAL, developed for assessing the performance of newly developed β-turn prediction method and it's ranking with respect to other existing β-turn prediction methods. Evaluation of a method can be carried out on a single protein or a number of proteins. It consists of clean data set of 426 non-homologous proteins with seven subsets of these proteins. Users can evaluate their method on any subset or a complete set of data. The method is assessed at amino acid level and performance is evaluated in terms of Qtotal, Qpredicted, Qobserved and MCC measures. The server also compares the performance of the method with other existing β-turn prediction methods such as Chou-Fasman algorithm, Thornton's algorithm, GORBTURN, 1-4 and 2-3 Correlation model, Sequence coupled model and BTPRED.

Item Type:Article
Source:Copyright of this article belongs to World Scientific Publishing Company.
Keywords:Evaluation; β-turns; Prediction; Protein; Performance Measures; Web Server
ID Code:86695
Deposited On:12 Mar 2012 15:50
Last Modified:12 Mar 2012 15:50

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