Browse by Fellow

Boshoff, Helena Ingrid ; Naz, Saba ; Dabral, Shruti ; Nagarajan, Sathya Narayanan ; Arora, Divya ; Singh, Lakshya Veer ; Kumar, Pradeep ; Singh, Yogendra ; Kumar, Dhiraj ; Varshney, Umesh ; Nandicoori, Vinay Kumar (2021) Compromised base excision repair pathway in Mycobacterium tuberculosis imparts superior adaptability in the host PLoS Pathogens, 17 (3). e1009452. ISSN 1553-7374

Khan, Mehak Zahoor ; Nandicoori, Vinay Kumar (2021) Deletion of pknG Abates Reactivation of Latent Mycobacterium tuberculosis in Mice Antimicrobial Agents and Chemotherapy, 65 (4). ISSN 0066-4804

Dubey, Neha ; Khan, Mehak Zahoor ; Kumar, Suresh ; Sharma, Aditya ; Das, Lahari ; Bhaduri, Asani ; Singh, Yogendra ; Nandicoori, Vinay Kumar (2021) Mycobacterium tuberculosis Peptidyl Prolyl Isomerase A Interacts With Host Integrin Receptor to Exacerbate Disease Progression Journal of Infectious Diseases, 224 (8). pp. 1383-1393. ISSN 0022-1899

Khan, Mehak Zahoor ; Singha, Biplab ; Ali, Mohammad Farhan ; Taunk, Khushman ; Rapole, Srikanth ; Gourinath, Samudrala ; Nandicoori, Vinay Kumar (2021) Redox homeostasis in Mycobacterium tuberculosis is modulated by a novel actinomycete‐specific transcription factor EMBO Journal, 40 (14). ISSN 0261-4189

Agarwal, Meetu ; Soni, Vijay ; Kumar, Suresh ; Singha, Biplab ; Nandicoori, Vinay Kumar (2021) Unique C-terminal extension and interactome of Mycobacterium tuberculosis GlmU impacts its in vivo function and the survival of the pathogen Biochemical Journal, 478 (11). pp. 2081-2099. ISSN 0264-6021

Bhaskar, Ashima ; Kumar, Santosh ; Khan, Mehak Zahoor ; Singh, Amit ; Dwivedi, Ved Prakash ; Nandicoori, Vinay Kumar (2020) Host sirtuin 2 as an immunotherapeutic target against tuberculosis elife, 9 . ISSN 2050-084X

Lochab, Savita ; Singh, Yogendra ; Sengupta, Sagar ; Nandicoori, Vinay Kumar (2020) Mycobacterium tuberculosis exploits host ATM kinase for survival advantage through SecA2 secretome elife, 9 . ISSN 2050-084X

Srivastava, Shruti ; Battu, Madhu Babu ; Khan, Mehak Zahoor ; Nandicoori, Vinay Kumar ; Mukhopadhyay, Sangita (2019) Mycobacterium tuberculosis PPE2 Protein Interacts with p67phox and Inhibits Reactive Oxygen Species Production The Journal of Immunology, 203 (5). pp. 1218-1229. ISSN 0022-1767

Arora, Divya ; Chawla, Yogesh ; Malakar, Basanti ; Singh, Archana ; Nandicoori, Vinay Kumar (2018) The transpeptidase PbpA and non-canonical transglycosylase RodA of Mycobacterium tuberculosis play important roles in regulating bacterial cell lengths Journal of Biological Chemistry, 293 . pp. 6497-6516. ISSN 0021-9258

Jain, Preeti ; Malakar, Basanti ; Khan, Mehak Zahoor ; Lochab, Savita ; Singh, Archana ; Nandicoori, Vinay Kumar (2018) Delineating FtsQ-mediated regulation of cell division in Mycobacterium tuberculosis Journal of Biological Chemistry, 293 (32). pp. 12331-12349. ISSN 0021-9258

Muniyan, Rajiniraja ; Varatharajan, Sabareesh ; Naz, Saba ; Nandicoori, Vinay K. ; Gurunathan, Jayaraman (2017) Allium sativum linn. contains linear alkylbenzene sulfonates that alter membrane fluidity for the inhibition of Mycobacterium tuberculosis H37RA Asian Journal of Pharmaceutical and Clinical Research, 10 (9). pp. 100-111. ISSN 0974-2441

Khan, Mehak Zahoor ; Bhaskar, Ashima ; Upadhyay, Sandeep ; Kumari, Pooja ; Rajmani, Raju S. ; Jain, Preeti ; Singh, Amit ; Kumar, Dhiraj ; Bhavesh, Neel Sarovar ; Nandicoori, Vinay Kumar (2017) Protein kinase G confers survival advantage to Mycobacterium tuberculosis during latency-like conditions Journal of Biological Chemistry, 292 (39). pp. 16093-16108. ISSN 0021-9258

Sengupta, Srabasti ; Naz, Saba ; Das, Ishani ; Ahad, Abdul ; Padhi, Avinash ; Naik, Sumanta Kumar ; Ganguli, Geetanjali ; Pattanaik, Kali Prasad ; Raghav, Sunil Kumar ; Nandicoori, Vinay Kumar ; Sonawane, Avinash (2017) Mycobacterium tuberculosis EsxL inhibits MHC-II expression by promoting hypermethylation in class-II transactivator loci in macrophages Journal of Biological Chemistry, 292 (17). pp. 6855-6868. ISSN 0021-9258

Yavvari, Prabhu S. ; Gupta, Siddhi ; Arora, Divya ; Nandicoori, Vinay K. ; Srivastava, Aasheesh ; Bajaj, Avinash (2017) Clathrin-independent killing of intracellular mycobacteria and biofilm disruptions using synthetic antimicrobial polymers Biomacromolecules, 18 (7). pp. 2024-2033. ISSN 1525-7797

Sharma, Aditya K. ; Arora, Divya ; Singh, Lalit K. ; Gangwal, Aakriti ; Sajid, Andaleeb ; Molle, Virginie ; Singh, Yogendra ; Nandicoori, Vinay Kumar (2016) Serine/threonine protein phosphatase PstP of Mycobacterium tuberculosis is necessary for accurate cell division and survival of pathogen Journal of Biological Chemistry, 291 (46). pp. 24215-24230. ISSN 0021-9258

Jhingan, Gagan Deep ; Kumari, Sangeeta ; Jamwal, Shilpa V. ; Kalam, Haroon ; Arora, Divya ; Jain, Neharika ; Kumaar, Lakshmi Krishna ; Samal, Areejit ; Rao, Kanury V. S. ; Kumar, Dhiraj ; Nandicoori, Vinay Kumar (2016) Comparative proteomic analyses of avirulent, virulent and clinical strains of mycobacterium tuberculosis identify strain-specific patterns Journal of Biological Chemistry, 291 (27). pp. 14257-14273. ISSN 0021-9258

Suryadevara, Priyanka ; Perumal, Yogeeswari ; Soni, Vijay ; Parthiban, Brindha Devi ; Nandicoori, Vinay Kumar ; Sriram, Dharmarajan (2016) Computational sampling and simulation based assessment of novel Mycobacterium tuberculosis glutamine synthetase inhibitors: Study involving structure based drug design and free energy perturbation Current Topics in Medicinal Chemistry, 16 (9). pp. 978-995. ISSN 1568-0266

Sharma, Garima ; Sowpati, Divya Tej ; Singh, Prakruti ; Khan, Mehak Zahoor ; Ganji, Rakesh ; Upadhyay, Sandeep ; Banerjee, Sharmistha ; Nandicoori, Vinay Kumar ; Khosla, Sanjeev (2016) Genome-wide non-CpG methylation of the host genome during M. tuberculosis infection Scientific Reports, 6 (1). Article ID 25006 -15 pages. ISSN 2045-2322

Yaseen, Imtiyaz ; Kaur, Prabhjot ; Nandicoori, Vinay Kumar ; Khosla, Sanjeev (2015) Mycobacteria modulate host epigenetic machinery by Rv1988 methylation of a non-tail arginine of histone H3 Nature Communications, 6 (1). Article ID 8922-13 pages. ISSN 2041-1723

Soni, Vijay ; Suryadevara, Priyanka ; Sriram, Dharmarajan ; Kumar, Santhosh ; Nandicoori, Vinay Kumar ; Yogeeswari, Perumal (2015) Structure-based design of diverse inhibitors of Mycobacterium tuberculosis N-acetylglucosamine-1-phosphate uridyltransferase: combined molecular docking, dynamic simulation and biological activity Journal of Molecular Modeling, 21 (7). 1Article ID 74. ISSN 1610-2940

Sharma, Garima ; Upadhyay, Sandeep ; Srilalitha, M. ; Nandicoori, Vinay K. ; Khosla, Sanjeev (2015) The interaction of mycobacterial protein Rv2966c with host chromatin is mediated through non-CpG methylation and histone H₃/H₄ binding Nucleic Acids Research, 43 (8). pp. 3922-3937. ISSN 0305-1048

Nagarajan, Sathya Narayanan ; Upadhyay, Sandeep ; Chawla, Yogesh ; Khan, Shazia ; Naz, Saba ; Subramanian, Jayashree ; Gandotra, Sheetal ; Nandicoori, Vinay Kumar (2015) Protein kinase A (PknA) of Mycobacterium tuberculosis is independently activated and is critical for growth in vitro and survival of the pathogen in the host Journal of Biological Chemistry, 290 (15). pp. 9626-9645. ISSN 0021-9258

Soni, Vijay ; Upadhayay, Sandeep ; Suryadevara, Priyanka ; Samla, Ganesh ; Singh, Archana ; Yogeeswari, Perumal ; Sriram, Dharmarajan ; Nandicoori, Vinay Kumar (2015) Depletion of M. tuberculosis GlmU from infected murine lungs effects the clearance of the pathogen PLoS Pathogens, 11 (10). Article ID e1005235-27 pages. ISSN 1553-7366

Chawla, Yogesh ; Upadhyay, Sandeep ; Khan, Shazia ; Nagarajan, Sathya Narayanan ; Forti, Francesca ; Nandicoori, Vinay Kumar (2014) Protein kinase B (PknB) of Mycobacterium tuberculosisIs essential for growth of the pathogenin vitroas well as for survival within the host Journal of Biological Chemistry, 289 (20). pp. 13858-13875. ISSN 0021-9258

Singhal, Anshika ; Arora, Gunjan ; Sajid, Andaleeb ; Maji, Abhijit ; Bhat, Ajay ; Virmani, Richa ; Upadhyay, Sandeep ; Nandicoori, Vinay K. ; Sengupta, Shantanu ; Singh, Yogendra (2013) Regulation of homocysteine metabolism by Mycobacterium tuberculosis S-adenosylhomocysteine hydrolase Scientific Reports, 3 (1). Article ID 2264 -13 pages. ISSN 2045-2322

Parikh, Amit ; Kumar, Devanand ; Chawla, Yogesh ; Kurthkoti, Krishna ; Khan, Shazia ; Varshney, Umesh ; Nandicoori, Vinay K. (2013) Development of a new generation of vectors for gene expression, gene replacement and protein-protein interaction studies in mycobacteria Applied and Environmental Microbiology, 79 (5). pp. 1718-1729. ISSN 0099-2240

Jagtap, Pravin Kumar Ankush ; Soni, Vijay ; Vithani, Neha ; Jhingan, Gagan Deep ; Bais, Vaibhav Singh ; Nandicoori, Vinay Kumar ; Prakash, Balaji (2012) Substrate-bound crystal structures reveal features unique to Mycobacterium tuberculosis N-acetyl-glucosamine 1-phosphate uridyltransferase and a catalytic mechanism for acetyl transfer Journal of Biological Chemistry, 287 (47). pp. 39524-39537. ISSN 0021-9258

Rajanala, Kalpana ; Nandicoori, Vinay Kumar (2012) Localization of nucleoporin Tpr to the Nuclear Pore Complex is essential for Tpr mediated regulation of the export of unspliced RNA PLoS One, 7 (1). Article ID e29921-17 pages. ISSN 1932-6203

Tiwari, Divya ; Singh, Rajnish Kumar ; Goswami, Kasturi ; Verma, Sunil Kumar ; Prakash, Balaji ; Nandicoori, Vinay Kumar (2009) Key residues in Mycobacterium tuberculosis Protein kinase G play a role in regulating kinase activity and survival in the host Journal of Biological Chemistry, 284 (40). pp. 27467-27479. ISSN 0021-9258

Sajish, Mathew ; Kalayil, Sissy ; Verma, Sunil Kumar ; Nandicoori, Vinay Kumar ; Prakash, Balaji (2009) The significance of EXDD and RXKD motif conservation in Rel proteins Journal of Biological Chemistry, 284 (14). pp. 9115-9123. ISSN 0021-9258

Parikh, Amit ; Verma, Sunil Kumar ; Khan, Shazia ; Prakash, Balaji ; Nandicoori, Vinay Kumar (2009) PknB-mediated phosphorylation of a novel substrate, n-acetylglucosamine-1-phosphate uridyltransferase, modulates its acetyltransferase activity Journal of Molecular Biology, 386 (2). pp. 451-464. ISSN 0022-2836

Verma, Sunil Kumar ; Jaiswal, Mamta ; Kumar, Neeraj ; Parikh, Amit ; Nandicoori, Vinay Kumar ; Prakash, Balaji (2009) Structure of N-acetylglucosamine-1-phosphate uridyltransferase (GlmU) from Mycobacterium tuberculosis in a cubic space group Acta Crystallographica Section F Structural Biology and Crystallization Communications, 65 (5). pp. 435-439. ISSN 1744-3091

Vomastek, Tomas ; Iwanicki, Marcin P. ; Burack, W. Richard ; Tiwari, Divya ; Kumar, Devanand ; Parsons, J. Thomas ; Weber, Michael J. ; Nandicoori, Vinay Kumar (2008) Extracellular signal-Regulated Kinase 2 (ERK2) phosphorylation sites and docking domain on the nuclear pore complex protein Tpr cooperatively regulate ERK2-Tpr interaction Molecular and Cellular Biology, 28 (22). pp. 6954-6966. ISSN 0270-7306

Vomastek, T. ; Iwanicki, M. P. ; Burack, W. R. ; Tiwari, D. ; Kumar, D. ; Parsons, J. T. ; Weber, M. J. ; Nandicoori, V. K. (2008) Extracellular signal-regulated Kinase 2 (ERK2) phosphorylation sites and docking domain on the nuclear pore complex protein Tpr cooperatively regulate ERK2-Tpr interaction Molecular and Cellular Biology, 28 (22). pp. 6954-6966. ISSN 0270-7306

Sajish, Mathew ; Tiwari, Divya ; Rananaware, Dimple ; Nandicoori, Vinay Kumar ; Prakash, Balaji (2007) A charge reversal differentiates (p)ppGpp synthesis by monofunctional and bifunctional Rel proteins Journal of Biological Chemistry, 282 (48). pp. 34977-34983. ISSN 0021-9258

Eblen, Scott T. ; Vinay Kumar, N. ; Weber, Michael J. (2007) Using genetically engineered kinases to screen for novel protein kinase substrates: generation of [γ-³²P]ATP analog from ADP analog Cold Spring Harbor Protocols, 2007 (8). No pp. given. ISSN 1559-6095

Eblen, Scott T. ; Vinay Kumar, N. ; Weber, Michael J. (2007) Using genetically engineered kinases to screen for novel protein kinase substrates: identification of a mutant kinase/ATP analog pair Cold Spring Harbor Protocols, 2007 (8). No pp. given. ISSN 1940-3402

Eblen, Scott T. ; Vinay Kumar, N. ; Weber, Michael J. (2007) Using genetically engineered kinases to screen for novel protein kinase substrates: phosphorylation of kinase-associated substrates Cold Spring Harbor Protocols, 2007 (8). No pp. given. ISSN 1940-3402

Eblen, Scott T. ; Vinay Kumar, N. ; Weber, Michael J. (2007) Using genetically engineered kinases to screen for novel protein kinase substrates: phosphorylation of substrates in cell lysates with exogenous kinase Cold Spring Harbor Protocols, 2007 (8). No pp. given. ISSN 1559-6095

Kumar, N. Vinay ; Eblen, Scott T. ; Weber, Michael J. (2004) Identifying specific kinase substrates through engineered kinases and ATP analogs Methods, 32 (4). pp. 389-397. ISSN 1046-2023

Eblen, Scott T. ; Kumar, N. Vinay ; Shah, Kavita ; Henderson, Michelle J. ; Watts, Colin K. W. ; Shokat, Kevan M. ; Weber, Michael J. (2003) Identification of Novel ERK2 substrates through use of an engineered kinase and ATP analogs Journal of Biological Chemistry, 278 (17). pp. 14926-14935. ISSN 0021-9258

Vinay Kumar, N. ; Bernstein, Lori R. (2001) A new analytical scale DNA affinity binding assay for analyses of specific protein–DNA interactions Analytical Biochemistry, 299 (2). pp. 203-210. ISSN 0003-2697

Vinay Kumar, N. ; Bernstein, Lori R. (2001) Ten ERK-related proteins in three distinct classes associate with AP-1 proteins and/or AP-1 DNA Journal of Biological Chemistry, 276 (34). pp. 32362-32372. ISSN 0021-9258