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Singh, Jayanti ; Anand, Ruchi ; Horovitz, Amnon ; Champion, Patricia A. (2022) Cooperativity in ATP Hydrolysis by MopR Is Modulated by Its Signal Reception Domain and by Its Protein and Phenol Concentrations Journal of Bacteriology, 204 (8). ISSN 0021-9193

Singh, Juhi ; Raina, Rahul ; Vinothkumar, Kutti R. ; Anand, Ruchi (2022) Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases ACS Chemical Biology, 17 (4). pp. 829-839. ISSN 1554-8929

Sahu, Subhankar ; Roy, Rohita ; Anand, Ruchi (2022) Harnessing the Potential of Biological Recognition Elements for Water Pollution Monitoring ACS Sensors, 7 (3). pp. 704-715. ISSN 2379-3694

Bhujbalrao, Ruchika ; Gavvala, Krishna ; Singh, Reman Kumar ; Singh, Juhi ; Boudier, Christian ; Chakrabarti, Sutapa ; Patwari, G. Naresh ; Mély, Yves ; Anand, Ruchi (2022) Identification of allosteric hotspots regulating the ribosomal RNA binding by antibiotic resistance-conferring Erm methyltransferases Journal of Biological Chemistry, 298 (8). p. 102208. ISSN 00219258

Sharma, Nandini ; Singh, Sukhwinder ; Tanwar, Ajay S. ; Mondal, Jagannath ; Anand, Ruchi (2022) Mechanism of Coordinated Gating and Signal Transduction in Purine Biosynthetic Enzyme Formylglycinamidine Synthetase ACS Catalysis, 12 (3). pp. 1930-1944. ISSN 2155-5435

Singh, Jayanti ; Sahil, Mohammad ; Ray, Shamayeeta ; Dcosta, Criss ; Panjikar, Santosh ; Krishnamoorthy, G. ; Mondal, Jagannath ; Anand, Ruchi (2022) Phenol sensing in nature is modulated via a conformational switch governed by dynamic allostery Journal of Biological Chemistry . p. 102399. ISSN 00219258

Mostert, Konrad J. ; Sharma, Nandini ; van der Zwaag, Marianne ; Staats, Roxine ; Koekemoer, Lizbé ; Anand, Ruchi ; Sibon, Ody C. M. ; Strauss, Erick (2021) The Coenzyme A Level Modulator Hopantenate (HoPan) Inhibits Phosphopantotenoylcysteine Synthetase Activity ACS Chemical Biology, 16 (11). pp. 2401-2414. ISSN 1554-8929

Mariam, Jessy ; Hoskere Ashoka, Anila ; Gaded, Vandana ; Ali, Firoj ; Malvi, Harshada ; Das, Amitava ; Anand, Ruchi (2021) Deciphering protein microenvironment by using a cysteine specific switch-ON fluorescent probe Organic & Biomolecular Chemistry, 19 (23). pp. 5161-5168. ISSN 1477-0520

Sen, Asmita ; Gaded, Vandana ; Jayapal, Prabha ; Rajaraman, Gopalan ; Anand, Ruchi (2021) Insights into the Dual Shuttle Catalytic Mechanism of Guanine Deaminase The Journal of Physical Chemistry B, 125 (31). pp. 8814-8826. ISSN 1520-6106

Singh, Jayanti ; Gaded, Vandana ; Bitra, Aruna ; Anand, Ruchi (2021) Structure guided mutagenesis reveals the substrate determinants of guanine deaminase Journal of Structural Biology, 213 (3). p. 107747. ISSN 10478477

Roy, Rohita ; Ray, Shamayeeta ; Chowdhury, Arindam ; Anand, Ruchi (2021) Tunable Multiplexed Whole-Cell Biosensors as Environmental Diagnostics for ppb-Level Detection of Aromatic Pollutants ACS Sensors, 6 (5). pp. 1933-1939. ISSN 2379-3694

Singh, Sukhwinder ; Anand, Ruchi (2021) Tunnel Architectures in Enzyme Systems that Transport Gaseous Substrates ACS Omega, 6 (49). pp. 33274-33283. ISSN 2470-1343

Sharma, Nandini ; Ahalawat, Navjeet ; Sandhu, Padmani ; Strauss, Erick ; Mondal, Jagannath ; Anand, Ruchi (2020) Role of allosteric switches and adaptor domains in long-distance cross-talk and transient tunnel formation Science Advances, 6 (14). ISSN 2375-2548

Bhaskar, Sukritee ; Steer, David L. ; Anand, Ruchi ; Panjikar, Santosh (2020) Structural basis for differentiation between two classes of thiolase: Degradative vs biosynthetic thiolase Journal of Structural Biology: X, 4 . p. 100018. ISSN 25901524

Bhujbalrao, Ruchika ; Anand, Ruchi (2019) Deciphering Determinants in Ribosomal Methyltransferases That Confer Antimicrobial Resistance Journal of the American Chemical Society, 141 (4). pp. 1425-1429. ISSN 0002-7863

Mariam, Jessy ; Krishnamoorthy, G. ; Anand, Ruchi (2019) Use of 6‐Methylisoxanthopterin, a Fluorescent Guanine Analog, to Probe Fob1‐Mediated Dynamics at the Stalling Fork Barrier DNA Sequences Chemistry – An Asian Journal, 14 (24). pp. 4760-4766. ISSN 1861-4728

Ray, Shamayeeta ; Panjikar, Santosh ; Anand, Ruchi (2018) Design of Protein-Based Biosensors for Selective Detection of Benzene Groups of Pollutants ACS Sensors, 3 (9). pp. 1632-1638. ISSN 2379-3694

Ray, Shamayeeta ; Senapati, Tamasri ; Sahu, Subhankar ; Bandyopadhyaya, Rajdip ; Anand, Ruchi (2018) Design of Ultrasensitive Protein Biosensor Strips for Selective Detection of Aromatic Contaminants in Environmental Wastewater Analytical Chemistry, 90 (15). pp. 8960-8968. ISSN 0003-2700

Gaded, Vandana ; Anand, Ruchi (2018) Nucleobase deaminases: a potential enzyme system for new therapies RSC Advances, 8 (42). pp. 23567-23577. ISSN 2046-2069

Mariam, Jessy ; Anand, Ruchi (2017) Fluorescence Quenching Studies of γ-Butyrolactone-Binding Protein (CprB) from Streptomyces coelicolor A3(2) Quorum Sensing, 1673 . pp. 131-143. ISSN 1064-3745

Ray, Shamayeeta ; Maitra, Anwesha ; Biswas, Anwesha ; Panjikar, Santosh ; Mondal, Jagannath ; Anand, Ruchi (2017) Functional insights into the mode of DNA and ligand binding of the TetR family regulator TylP from Streptomyces fradiae Journal of Biological Chemistry, 292 (37). pp. 15301-15311. ISSN 00219258

Bitra, Aruna ; Sistla, Srinivas ; Mariam, Jessy ; Malvi, Harshada ; Anand, Ruchi (2017) Rassf Proteins as Modulators of Mst1 Kinase Activity Scientific Reports, 7 (1). ISSN 2045-2322

Gaded, Vandana ; Anand, Ruchi (2017) Selective Deamination of Mutagens by a Mycobacterial Enzyme Journal of the American Chemical Society, 139 (31). pp. 10762-10768. ISSN 0002-7863

Biswas, Anwesha ; Mariam, Jessy ; Kombrabail, Mamta ; Narayan, Satya ; Krishnamoorthy, G. ; Anand, Ruchi (2017) Site-Specific Fluorescence Dynamics To Probe Polar Arrest by Fob1 in Replication Fork Barrier Sequences ACS Omega, 2 (10). pp. 7389-7399. ISSN 2470-1343

Bhukya, Hussain ; Jana, Asis K. ; Sengupta, Neelanjana ; Anand, Ruchi (2017) Structural and dynamics studies of the TetR family protein, CprB from Streptomyces coelicolor in complex with its biological operator sequence Journal of Structural Biology, 198 (2). pp. 134-146. ISSN 10478477

Ray, Shamayeeta ; Panjikar, Santosh ; Anand, Ruchi (2017) Structure Guided Design of Protein Biosensors for Phenolic Pollutants ACS Sensors, 2 (3). pp. 411-418. ISSN 2379-3694

Bhukya, Hussain ; Anand, Ruchi (2017) TetR Regulators: A Structural and Functional Perspective Journal of the Indian Institute of Science, 97 (2). pp. 245-259. ISSN 0970-4140

Ray, Shamayeeta ; Gunzburg, Menachem J. ; Wilce, Matthew ; Panjikar, Santosh ; Anand, Ruchi (2016) Structural Basis of Selective Aromatic Pollutant Sensing by the Effector Binding Domain of MopR, an NtrC Family Transcriptional Regulator ACS Chemical Biology, 11 (8). pp. 2357-2365. ISSN 1554-8929

Tanwar, Ajay S. ; Sindhikara, Daniel J. ; Hirata, Fumio ; Anand, Ruchi (2015) Determination of the Formylglycinamide Ribonucleotide Amidotransferase Ammonia Pathway by Combining 3D-RISM Theory with Experiment ACS Chemical Biology, 10 (3). pp. 698-704. ISSN 1554-8929

Biswas, Anwesha ; Narayan, Satya ; Kallianpur, Mamata V. ; Krishnamoorthy, G. ; Anand, Ruchi (2015) Mode of DNA binding with γ-butyrolactone receptor protein CprB from Streptomyces coelicolor revealed by site-specific fluorescence dynamics Biochimica et Biophysica Acta (BBA) - General Subjects, 1850 (11). pp. 2283-2292. ISSN 03044165

Biswas, Anwesha ; Swarnkar, Ravi K. ; Hussain, Bhukya ; Sahoo, Suraj K. ; Pradeepkumar, P. I. ; Patwari, G. Naresh ; Anand, Ruchi (2014) Fluorescence Quenching Studies of γ-Butyrolactone Binding Protein (CprB) from Streptomyces coelicolor A3(2) The Journal of Physical Chemistry B, 118 (34). pp. 10035-10042. ISSN 1520-6106

Bhukya, Hussain ; Bhujbalrao, Ruchika ; Bitra, Aruna ; Anand, Ruchi (2014) Structural and functional basis of transcriptional regulation by TetR family protein CprB from S. coelicolor A3(2) Nucleic Acids Research, 42 (15). pp. 10122-10133. ISSN 0305-1048

Kotha, S. ; Goyal, D. ; Bitra, A. ; Thota, N. ; Kruger, G. ; Anand, R. (2013) Diversity oriented approach to triazole based peptidomimetics as mammalian sterile 20 kinase inhibitors RSC Advances, 3 (46). p. 24447. ISSN 2046-2069

Bitra, Aruna ; Hussain, Bhukya ; Tanwar, Ajay Singh ; Anand, Ruchi (2013) Identification of Function and Mechanistic Insights of Guanine Deaminase from Nitrosomonas europaea: Role of the C-Terminal Loop in Catalysis Biochemistry, 52 (20). pp. 3512-3522. ISSN 0006-2960

Srinivasan, Narayanaswamy ; Tanwar, Ajay Singh ; Goyal, Venuka Durani ; Choudhary, Deepanshu ; Panjikar, Santosh ; Anand, Ruchi (2013) Importance of Hydrophobic Cavities in Allosteric Regulation of Formylglycinamide Synthetase: Insight from Xenon Trapping and Statistical Coupling Analysis PLoS ONE, 8 (11). e77781. ISSN 1932-6203

Bitra, Aruna ; Biswas, Anwesha ; Anand, Ruchi (2013) Structural Basis of the Substrate Specificity of Cytidine Deaminase Superfamily Guanine Deaminase Biochemistry, 52 (45). pp. 8106-8114. ISSN 0006-2960

Tanwar, Ajay Singh ; Morar, Marya ; Panjikar, Santosh ; Anand, Ruchi (2012) Formylglycinamide ribonucleotide amidotransferase fromSalmonella typhimurium: role of ATP complexation and the glutaminase domain in catalytic coupling Acta Crystallographica Section D Biological Crystallography, 68 (6). pp. 627-636. ISSN 0907-4449

Anand, Ruchi ; Maksimoska, Jasna ; Pagano, Nicholas ; Wong, Eric Y. ; Gimotty, Phyllis A. ; Diamond, Scott L. ; Meggers, Eric ; Marmorstein, Ronen (2009) Toward the Development of a Potent and Selective Organoruthenium Mammalian Sterile 20 Kinase Inhibitor Journal of Medicinal Chemistry, 52 (6). pp. 1602-1611. ISSN 0022-2623

Anand, Ruchi ; Kim, Ah-Young ; Brent, Michael ; Marmorstein, Ronen (2008) Biochemical Analysis of MST1 Kinase: Elucidation of a C-Terminal Regulatory Region Biochemistry, 47 (25). pp. 6719-6726. ISSN 0006-2960

Brent, Michael M. ; Anand, Ruchi ; Marmorstein, Ronen (2008) Structural Basis for DNA Recognition by FoxO1 and Its Regulation by Posttranslational Modification Structure, 16 (9). pp. 1407-1416. ISSN 09692126

Anand, Ruchi ; Marmorstein, Ronen (2007) Structure and Mechanism of Lysine-specific Demethylase Enzymes Journal of Biological Chemistry, 282 (49). pp. 35425-35429. ISSN 00219258

Morar, Mariya ; Anand, Ruchi ; Hoskins, Aaron A. ; Stubbe, JoAnne ; Ealick, Steven E. (2006) Complexed Structures of Formylglycinamide Ribonucleotide Amidotransferase from Thermotoga maritima Describe a Novel ATP Binding Protein Superfamily, Biochemistry, 45 (50). pp. 14880-14895. ISSN 0006-2960

Anand, Ruchi ; Hoskins, Aaron A. ; Stubbe, JoAnne ; Ealick, Steven E. (2004) Domain Organization of Salmonella typhimurium Formylglycinamide Ribonucleotide Amidotransferase Revealed by X-ray Crystallography, Biochemistry, 43 (32). pp. 10328-10342. ISSN 0006-2960

Hoskins, Aaron A. ; Anand, Ruchi ; Ealick, Steven E. ; Stubbe, JoAnne (2004) The Formylglycinamide Ribonucleotide Amidotransferase Complex from Bacillus subtilis: Metabolite-Mediated Complex Formation Biochemistry, 43 (32). pp. 10314-10327. ISSN 0006-2960

Anand, Ruchi ; Hoskins, Aaron A. ; Bennett, Eric M. ; Sintchak, Michael D. ; Stubbe, JoAnne ; Ealick, Steven E. (2004) A Model for the Bacillus subtilis Formylglycinamide Ribonucleotide Amidotransferase Multiprotein Complex, Biochemistry, 43 (32). pp. 10343-10352. ISSN 0006-2960

Bennett, Eric M ; Anand, Ruchi ; Allan, Paula W ; Hassan, Abdalla E.A ; Hong, Jeong S ; Levasseur, Dana N ; McPherson, David T ; Parker, William B ; Secrist, John A ; Sorscher, Eric J ; Townes, Tim M ; Waud, William R ; Ealick, Steven E (2003) Designer Gene Therapy Using an Escherichia coli Purine Nucleoside Phosphorylase/Prodrug System Chemistry & Biology, 10 (12). pp. 1173-1181. ISSN 10745521

Anand, Ruchi ; Dorrestein, Pieter C. ; Kinsland, Cynthia ; Begley, Tadhg P. ; Ealick, Steven E. (2002) Structure of Oxalate Decarboxylase from Bacillus subtilis at 1.75 Å Resolution, Biochemistry, 41 (24). pp. 7659-7669. ISSN 0006-2960