Items where Author is "Upadhyaya, Hari D."

Article

Sinha, Pallavi ; Singh, Vikas K. ; Saxena, Rachit K. ; Khan, Aamir W. ; Abbai, Ragavendran ; Chitikineni, Annapurna ; Desai, Aarthi ; Molla, Johiruddin ; Upadhyaya, Hari D. ; Kumar, Arvind ; Varshney, Rajeev K. (2020) Superior haplotypes for haplotype‐based breeding for drought tolerance in pigeonpea ( Cajanus cajan L.) Plant Biotechnology, 18 (12). pp. 2482-2490. ISSN 1467-7644

Jensen, Sarah E. ; Charles, Jean Rigaud ; Muleta, Kebede ; Bradbury, Peter ; Casstevens, Terry ; Deshpande, Santosh P. ; Gore, Michael A. ; Gupta, Rajeev ; Ilut, Daniel C. ; Johnson, Lynn ; Lozano, Roberto ; Miller, Zachary ; Ramu, Punna ; Rathore, Abhishek ; Romay, M. Cinta ; Upadhyaya, Hari D. ; Varshney, Rajeev ; Morris, Geoffrey P. ; Pressoir, Gael ; Buckler, Edward S. ; Ramstein, Guillaume P. (2020) A sorghum Practical Haplotype Graph facilitates genome-wide imputation and cost-effective genomic prediction The Plant Genome, 13 (1). e20009. ISSN 1940-3372

Jensen, Sarah E. ; Charles, Jean Rigaud ; Muleta, Kebede ; Bradbury, Peter J. ; Casstevens, Terry ; Deshpande, Santosh P. ; Gore, Michael A. ; Gupta, Rajeev ; Ilut, Daniel C. ; Johnson, Lynn ; Lozano, Roberto ; Miller, Zachary ; Ramu, Punna ; Rathore, Abhishek ; Romay, M. Cinta ; Upadhyaya, Hari D. ; Varshney, Rajeev K. ; Morris, Geoffrey P. ; Pressoir, Gael ; Buckler, Edward S. ; Ramstein, Guillaume P. (2020) A sorghum practical haplotype graph facilitates genome‐wide imputation and cost‐effective genomic prediction The Plant Genome, 13 (1). ISSN 1940-3372

Pandey, Arun K. ; Sudini, Hari K. ; Upadhyaya, Hari D. ; Varshney, Rajeev K. ; Pandey, Manish K. (2019) Hypoallergen Peanut Lines Identified Through Large-Scale Phenotyping of Global Diversity Panel: Providing Hope Toward Addressing One of the Major Global Food Safety Concerns Frontiers in Genetics, 10 . ISSN 1664-8021

Chanda Venkata, Sameer Kumar ; Nadigatla Veera Prabha Rama, Ganga Rao ; Saxena, Rachit K. ; Saxena, Kulbhushan ; Upadhyaya, Hari D. ; Siambi, Moses ; Silim, Said N. ; Reddy, Kothapally Narasimha ; Hingane, Anupama J. ; Sharma, Mamta ; Sharma, Shivali ; Lyimo, Stephen Dominic ; Ubwe, Rose ; Makenge, Meshack ; Gad, Kananji ; Kimurto, Paul Kiprotich ; Amane, Manuel ; Kanenga, Kennedy ; Obong, Yuventino ; Monyo, Emanuel ; Ojiewo, Chris ; Mallela Venkata, Nagesh Kumar ; Polineni Rao, Jaganmohan ; Lakkireddy, Prashanthi ; Chourat, Sudhakar ; Singh, Indraprakash ; Sajja, Sobhan ; Hirikara Beliappa, Shruthi ; Varshney, Rajeev K. ; Ordon, Frank (2019) Pigeonpea improvement: An amalgam of breeding and genomic research Plant Breeding, 138 (4). pp. 445-454. ISSN 0179-9541

Varshney, Rajeev K. ; Thudi, Mahendar ; Roorkiwal, Manish ; He, Weiming ; Upadhyaya, Hari D. ; Yang, Wei ; Bajaj, Prasad ; Cubry, Philippe ; Rathore, Abhishek ; Jian, Jianbo ; Doddamani, Dadakhalandar ; Khan, Aamir W. ; Garg, Vanika ; Chitikineni, Annapurna ; Xu, Dawen ; Gaur, Pooran M. ; Singh, Narendra P. ; Chaturvedi, Sushil K. ; Nadigatla, Gangarao V. P. R. ; Krishnamurthy, Lakshmanan ; Dixit, G. P. ; Fikre, Asnake ; Kimurto, Paul K. ; Sreeman, Sheshshayee M. ; Bharadwaj, Chellapilla ; Tripathi, Shailesh ; Wang, Jun ; Lee, Suk-Ha ; Edwards, David ; Polavarapu, Kavi Kishor Bilhan ; Penmetsa, R. Varma ; Crossa, José ; Nguyen, Henry T. ; Siddique, Kadambot H. M. ; Colmer, Timothy D. ; Sutton, Tim ; von Wettberg, Eric ; Vigouroux, Yves ; Xu, Xun ; Liu, Xin (2019) Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits Nature Genetics, 51 (5). pp. 857-864. ISSN 1061-4036

Khedikar, Yogendra ; Pandey, Manish K. ; Sujay, V. ; Singh, Sube ; Nayak, Spurthi N. ; Klein-Gebbinck, Henry W. ; Sarvamangala, Cholin ; Mukri, Ganapati ; Garg, Vanika ; Upadhyaya, Hari D. ; Nadaf, H. L. ; Gowda, M. V. C. ; Varshney, Rajeev K. ; Bhat, Ramesh S. (2018) Identification of main effect and epistatic quantitative trait loci for morphological and yield-related traits in peanut (Arachis hypogaea L.) Molecular Breeding, 38 (1). ISSN 1380-3743

Pandey, Manish K. ; Agarwal, Gaurav ; Kale, Sandip M. ; Clevenger, Josh ; Nayak, Spurthi N. ; Sriswathi, Manda ; Chitikineni, Annapurna ; Chavarro, Carolina ; Chen, Xiaoping ; Upadhyaya, Hari D. ; Vishwakarma, Manish K. ; Leal-Bertioli, Soraya ; Liang, Xuanqiang ; Bertioli, David J. ; Guo, Baozhu ; Jackson, Scott A. ; Ozias-Akins, Peggy ; Varshney, Rajeev K. (2017) Development and Evaluation of a High Density Genotyping ‘Axiom_Arachis’ Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut Scientific Reports, 7 (1). ISSN 2045-2322

Purushothaman, Ramamoorthy ; Krishnamurthy, Lakshmanan ; Upadhyaya, Hari D. ; Vadez, Vincent ; Varshney, Rajeev K. (2017) Genotypic variation in soil water use and root distribution and their implications for drought tolerance in chickpea Functional Plant Biology, 44 (2). p. 235. ISSN 1445-4408

Sharma, Shivali ; Pandey, Manish K. ; Sudini, Hari K. ; Upadhyaya, Hari D. ; Varshney, Rajeev K. (2017) Harnessing Genetic Diversity of Wild Arachis Species for Genetic Enhancement of Cultivated Peanut Crop Science, 57 (3). pp. 1121-1131. ISSN 0011-183X

Ramamoorthy, Purushothaman ; Lakshmanan, Krishnamurthy ; Upadhyaya, Hari D. ; Vadez, Vincent ; Varshney, Rajeev K. (2017) Root traits confer grain yield advantages under terminal drought in chickpea ( Cicer arietinum L.) Field Crops Research, 201 . pp. 146-161. ISSN 0378-4290

Varshney, Rajeev K. ; Saxena, Rachit K. ; Upadhyaya, Hari D. ; Khan, Aamir W. ; Yu, Yue ; Kim, Changhoon ; Rathore, Abhishek ; Kim, Dongseon ; Kim, Jihun ; An, Shaun ; Kumar, Vinay ; Anuradha, Ghanta ; Yamini, Kalinati Narasimhan ; Zhang, Wei ; Muniswamy, Sonnappa ; Kim, Jong-So ; Penmetsa, R. Varma ; von Wettberg, Eric ; Datta, Swapan K. (2017) Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits Nature Genetics, 49 . pp. 1082-1088. ISSN 1061-4036

Bajaj, Deepak ; Upadhyaya, Hari D. ; Khan, Yusuf ; Das, Shouvik ; Badoni, Saurabh ; Shree, Tanima ; Kumar, Vinod ; Tripathi, Shailesh ; Gowda, C. L. L. ; Singh, Sube ; Sharma, Shivali ; Tyagi, Akhilesh K. ; Chattopdhyay, Debasis ; Parida, Swarup K. (2015) A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea Scientific Reports, 5 . Article ID 9264. ISSN 2045-2322

Roorkiwal, Manish ; Nayak, Spurthi N. ; Thudi, Mahendar ; Upadhyaya, Hari D. ; Brunel, Dominique ; Mournet, Pierre ; This, Dominique ; Sharma, Prakash C. ; Varshney, Rajeev K. (2014) Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers Frontiers in Plant Science, 5 . ISSN 1664-462X

Kumari, Varsha ; Gowda, M.V.C. ; Tasiwal, Vinod ; Pandey, Manish K. ; Bhat, Ramesh S. ; Mallikarjuna, Nalini ; Upadhyaya, Hari D. ; Varshney, Rajeev K. (2014) Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.) The Crop Journal, 2 (2-3). pp. 110-119. ISSN 2214-5141

Zhang, Tianzhen ; Roorkiwal, Manish ; von Wettberg, Eric J. ; Upadhyaya, Hari D. ; Warschefsky, Emily ; Rathore, Abhishek ; Varshney, Rajeev K. (2014) Exploring Germplasm Diversity to Understand the Domestication Process in Cicer spp. Using SNP and DArT Markers PLoS One, 9 (7). e102016. ISSN 1932-6203

Prasad, Manoj ; Saxena, Rachit K. ; von Wettberg, Eric ; Upadhyaya, Hari D. ; Sanchez, Vanessa ; Songok, Serah ; Saxena, Kulbhushan ; Kimurto, Paul ; Varshney, Rajeev K. (2014) Genetic Diversity and Demographic History of Cajanus spp. Illustrated from Genome-Wide SNPs PLoS One, 9 (2). e88568. ISSN 1932-6203

Prasad, Manoj ; Pandey, Manish K. ; Upadhyaya, Hari D. ; Rathore, Abhishek ; Vadez, Vincent ; Sheshshayee, M. S. ; Sriswathi, Manda ; Govil, Mansee ; Kumar, Ashish ; Gowda, M. V. C. ; Sharma, Shivali ; Hamidou, Falalou ; Kumar, V. Anil ; Khera, Pawan ; Bhat, Ramesh S. ; Khan, Aamir W. ; Singh, Sube ; Li, Hongjie ; Monyo, Emmanuel ; Nadaf, H. L. ; Mukri, Ganapati ; Jackson, Scott A. ; Guo, Baozhu ; Liang, Xuanqiang ; Varshney, Rajeev K. (2014) Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World PLoS One, 9 (8). e105228. ISSN 1932-6203

Varshney, Rajeev K. ; Song, Chi ; Saxena, Rachit K. ; Azam, Sarwar ; Yu, Sheng ; Sharpe, Andrew G. ; Cannon, Steven ; Baek, Jongmin ; Rosen, Benjamin D. ; Tar'an, Bunyamin ; Millan, Teresa ; Zhang, Xudong ; Ramsay, Larissa D. ; Iwata, Aiko ; Wang, Ying ; Nelson, William ; Farmer, Andrew D. ; Gaur, Pooran M. ; Soderlund, Carol ; Penmetsa, R Varma ; Xu, Chunyan ; Bharti, Arvind K. ; He, Weiming ; Winter, Peter ; Zhao, Shancen ; Hane, James K. ; Carrasquilla-Garcia, Noelia ; Condie, Janet A. ; Upadhyaya, Hari D. ; Luo, Ming-Cheng ; Thudi, Mahendar ; Gowda, C. L. L. ; Singh, Narendra P. ; Lichtenzveig, Judith ; Gali, Krishna K. ; Rubio, Josefa ; Nadarajan, N. ; Dolezel, Jaroslav ; Bansal, Kailash C ; Xu, Xun ; Edwards, David ; Zhang, Gengyun ; Kahl, Guenter ; Gil, Juan ; Singh, Karam B. ; Datta, Swapan K. ; Jackson, Scott A. ; Wang, Jun ; Cook, Douglas R. (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement Nature Biotechnology, 31 (3). pp. 240-246. ISSN 1087-0156

Pandey, Manish K. ; Monyo, Emmanuel ; Ozias-Akins, Peggy ; Liang, Xuanquiang ; Guimarães, Patricia ; Nigam, Shyam N. ; Upadhyaya, Hari D. ; Janila, Pasupuleti ; Zhang, Xinyou ; Guo, Baozhu ; Cook, Douglas R. ; Bertioli, David J. ; Michelmore, Richard ; Varshney, Rajeev K. (2012) Advances in Arachis genomics for peanut improvement Biotechnology Advances, 30 (3). pp. 639-651. ISSN 0734-9750

Shiu, Shin-Han ; Kassa, Mulualem T. ; Penmetsa, R. Varma ; Carrasquilla-Garcia, Noelia ; Sarma, Birinchi K. ; Datta, Subhojit ; Upadhyaya, Hari D. ; Varshney, Rajeev K. ; von Wettberg, Eric J. B. ; Cook, Douglas R. (2012) Genetic Patterns of Domestication in Pigeonpea (Cajanus cajan (L.) Millsp.) and Wild Cajanus Relatives PLoS One, 7 (6). e39563. ISSN 1932-6203

Hiremath, Pavana J. ; Kumar, Ashish ; Penmetsa, Ramachandra Varma ; Farmer, Andrew ; Schlueter, Jessica A. ; Chamarthi, Siva K. ; Whaley, Adam M. ; Carrasquilla‐Garcia, Noelia ; Gaur, Pooran M. ; Upadhyaya, Hari D. ; Kavi Kishor, Polavarapu B. ; Shah, Trushar M. ; Cook, Douglas R. ; Varshney, Rajeev K. (2012) Large‐scale development of cost‐effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes Plant Biotechnology, 10 (6). pp. 716-732. ISSN 1467-7644

Gujaria, Neha ; Kumar, Ashish ; Dauthal, Preeti ; Dubey, Anuja ; Hiremath, Pavana ; Bhanu Prakash, A. ; Farmer, Andrew ; Bhide, Mangla ; Shah, Trushar ; Gaur, Pooran M. ; Upadhyaya, Hari D. ; Bhatia, Sabhyata ; Cook, Douglas R. ; May, Greg D. ; Varshney, Rajeev K. (2011) Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.) Theoretical and Applied Genetics (TAG), 122 (8). pp. 1577-1589. ISSN 0040-5752

Hansson, Bengt ; Thudi, Mahendar ; Bohra, Abhishek ; Nayak, Spurthi N. ; Varghese, Nicy ; Shah, Trushar M. ; Penmetsa, R. Varma ; Thirunavukkarasu, Nepolean ; Gudipati, Srivani ; Gaur, Pooran M. ; Kulwal, Pawan L. ; Upadhyaya, Hari D. ; KaviKishor, Polavarapu B. ; Winter, Peter ; Kahl, Günter ; Town, Christopher D. ; Kilian, Andrzej ; Cook, Douglas R. ; Varshney, Rajeev K. (2011) Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.) PLoS One, 6 (11). e27275. ISSN 1932-6203

Nayak, Spurthi N. ; Balaji, Jayashree ; Upadhyaya, Hari D. ; Hash, Tom C. ; Kishor, Kavi P. B. ; Chattopadhyay, Debasis ; Rodriquez, Lina María ; Blair, Matthew W. ; Baum, Michael ; McNally, Kenneth ; This, Dominique ; Hoisington, David A. ; Varshney, Rajeev K. (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species Plant Science, 177 (5). pp. 460-467. ISSN 0168-9452

Nayak, Spurthi N. ; Balaji, Jayashree ; Upadhyaya, Hari D. ; Hash, C. Tom ; Kishor, P.B. Kavi ; Chattopadhyay, Debasis ; Rodriquez, Lina María ; Blair, Matthew W. ; Baum, Michael ; McNally, Kenneth ; This, Dominique ; Hoisington, David A. ; Varshney, Rajeev K. (2009) Isolation and sequence analysis of DREB2A homologues in three cereal and two legume species Plant Science, 177 (5). pp. 460-467. ISSN 0168-9452