Items where Author is "Pugalenthi, Ganesan"

Shameer, Khader ; Shingate, Prashant N. ; Manjunath, S. C. P. ; Karthika, M. ; Pugalenthi, Ganesan ; Sowdhamini, Ramanathan (2011) 3DSwap: curated knowledgebase of proteins involved in 3D domain swapping Database, 2011 . pp. 1-15. ISSN 1758-0463

Shameer, Khader ; Pugalenthi, Ganesan ; Kandaswamy, Krishna Kumar ; Sowdhamini, Ramanathan (2011) 3dswap-pred: prediction of 3D domain swapping from protein sequence using random forest approach Protein and Peptide Letters, 18 (10). pp. 1010-1020. ISSN 0929-8665

Shameer, Khader ; Pugalenthi, Ganesan ; Kandaswamy, Krishna Kumar ; Suganthan, Ponnuthurai N. ; Archunan, Govindaraju ; Sowdhamini, Ramanathan (2010) Insights into protein sequence and structure-derived features mediating 3D domain swapping mechanism using support vector machine based approach Bioinformatics and Biology Insights (4). pp. 33-42. ISSN 1177-9322

Kolatkar, Prasanna R. ; Martinetz, Thomas ; Sowdhamini, R. ; Suganthan, P. N. ; Kandaswamy, Krishna Kumar ; Pugalenthi, Ganesan (2010) SMpred: a support vector machine approach to identify structural motifs in protein structure without using evolutionary information Journal of Biomolecular Structure and Dynamics, 28 (3). pp. 405-414. ISSN 0739-1102

Pugalenthi, Ganesan ; Kandaswamy, Krishna Kumar ; Suganthan, P. N. ; Archunan, G. ; Sowdhamini, R. (2010) Identification of functionally diverse lipocalin proteins from sequence information using support vector machine Amino Acids, 39 (3). pp. 777-783. ISSN 1438-2199

Pugalenthi, Ganesan ; Tang, Ke ; Suganthan, P. N. ; Archunan, G. ; Sowdhamini, R. (2007) A machine learning approach for the identification of odorant binding proteins from sequence-derived properties BMC Bioinformatics, 8 . 351_1-351_7. ISSN 1471-2105

Pugalenthi, Ganesan ; Suganthan, P. N. ; Sowdhamini, R. ; Chakrabarti, Saikat (2007) MegaMotifBase: a database of structural motifs in protein families and superfamilies Nucleic Acids Research, 36 (S-1). D218-D221. ISSN 0305-1048

Pugalenthi, Ganesan ; Suganthan, P. N. ; Sowdhamini, R. ; Chakrabarti, Saikat (2007) SMotif: a server for structural motifs in proteins Bioinformatics, 23 (5). pp. 637-638. ISSN 1367-4803

Chakrabarti, Saikat ; Manohari, Gowri ; Pugalenthi, Ganesan ; Sowdhamini, Ramanathan (2006) SSToSS - sequence-structural templates of single-member superfamilies In Silico Biology, 6 (4). pp. 311-319. ISSN 1386-6338

Pugalenthi, Ganesan ; Bhaduri, Anirban ; Sowdhamini, R. (2006) iMOTdb-a comprehensive collection of spatially interacting motifs in proteins Nucleic Acids Research, 34 (S-1). D285-D286. ISSN 0305-1048

Pugalenthi, Ganesan ; Archunan, Govindaraju ; Sowdhamini, Ramanathan (2005) DIAL: a web-based server for the automatic identification of structural domains in proteins Nucleic Acids Research, 33 (S-2). W130-W132. ISSN 0305-1048

Pugalenthi, Ganesan ; Bhaduri, Anirban ; Sowdhamini, Ramanathan (2005) GenDiS: Genomic Distribution of protein structural domain Superfamilies Nucleic Acids Research, 33 (S-1). D252-D255. ISSN 0305-1048

Chakrabarti, Saikat ; Prem Anand, A. ; Bhardwaj, Nitin ; Pugalenthi, Ganesan ; Sowdhamini, R. (2005) SCANMOT: searching for similar sequences using a simultaneous scan of multiple sequence motifs Nucleic Acids Research, 33 (S-2). W274-W276. ISSN 0305-1048

Bhaduri, Anirban ; Pugalenthi, Ganesan ; Sowdhamini, Ramanathan (2004) PASS2: an automated database of protein alignments organised as structural superfamilies BMC Bioinformatics, 5 . 35_1-35_7. ISSN 1471-2105