Browse by Fellow

Number of items: 90.

Himeoka, Yusuke ; Kirkegaard, Julius B. ; Mitarai, Namiko ; Krishna, Sandeep (2024) Roles of network topology in the relaxation dynamics of simple chemical reaction network models Scientific Reports, 14 (1). ISSN 2045-2322

Buddh, Shyamsunder ; Krishna, Sandeep ; Agashe, Deepa (2024) Density dependent survival drives variation in density dependent population growth of an insect pest Oikos, 2024 (12). ISSN 0030-1299

Rajagopal Padma, M. ; Dinesh, Prameela ; Sundaresan, Rajesh ; Athreya, Siva ; Shiju, Shilpa ; Maroor, Parimala S. ; Lalitha Hande, R. ; Akhtar, Jawaid ; Chandra, Trilok ; Ravi, Deepa ; Lobo, Eunice ; Ana, Yamuna ; Shriyan, Prafulla ; Desai, Anita ; Rangaiah, Ambica ; Munivenkatappa, Ashok ; Krishna, S. ; Basawarajappa, Shantala Gowdara ; Sreedhara, H.G. ; Siddesh, K.C. ; Kumari, B. Amrutha ; Umar, Nawaz ; Mythri, B.A. ; Mythri, K.M. ; Sudarshan, Mysore Kalappa ; Vasanthapuram, Ravi ; Rathnaiah Babu, Giridhara (2024) Corrigendum to “Second round statewide sentinel-based population survey for estimation of the burden of active infection and anti-SARS-CoV-2 IgG antibodies in the general population of Karnataka, India, during January-February 2021” [IJID Regions Vol 1(2021) pages 107–116] IJID Regions, 10 . p. 150. ISSN 27727076

Mozaffer, Farhina ; Cherian, Philip ; Krishna, Sandeep ; Wahl, Brian ; Menon, Gautam I. (2023) Effect of hybrid immunity, school reopening, and the Omicron variant on the trajectory of the COVID-19 epidemic in India: a modelling study The Lancet Regional Health - Southeast Asia, 8 . p. 100095. ISSN 2772-3682

Jeancolas, C. ; Singh, A.Y. ; Jain, S. ; Krishna, S. ; Nghe, P. (2023) An interdisciplinary effort to understand chemical organizations at the origin of life iScience, 26 (1). p. 105834. ISSN 2589-0042

Eriksen, Rasmus Skytte ; Malhotra, Nitish ; Seshasayee, Aswin Sai Narain ; Sneppen, Kim ; Krishna, Sandeep (2022) Emergence of networks of shared restriction-modification systems in phage–bacteria ecosystems Journal of Biosciences, 47 (3). ISSN 0250-5991

Padma, M Rajagopal ; Dinesh, Prameela ; Sundaresan, Rajesh ; Athreya, Siva ; Shiju, Shilpa ; Maroor, Parimala S ; Hande, R Lalitha ; Akhtar, Jawaid ; Chandra, Trilok ; Ravi, Deepa ; Lobo, Eunice ; Ana, Yamuna ; Shriyan, Prafulla ; Desai, Anita ; Rangaiah, Ambica ; Munivenkatappa, Ashok ; Krishna, S ; Basawarajappa, Shantala Gowdara ; Sreedhara, HG ; Siddesh, KC ; Amrutha Kumari, B ; Umar, Nawaz ; Mythri, BA ; Mythri, KM ; Sudarshan, Mysore Kalappa ; Vasanthapuram, Ravi ; Babu, Giridhara R (2021) Second round statewide sentinel-based population survey for estimation of the burden of active infection and anti-SARS-CoV-2 IgG antibodies in the general population of Karnataka, India, during January-February 2021 IJID Regions, 1 . pp. 107-116. ISSN 27727076

Charlat, Sylvain ; Ariew, André ; Bourrat, Pierrick ; Ferreira Ruiz, María ; Heams, Thomas ; Huneman, Philippe ; Krishna, Sandeep ; Lachmann, Michael ; Lartillot, Nicolas ; Le Sergeant d'Hendecourt, Louis ; Malaterre, Christophe ; Nghe, Philippe ; Rajon, Etienne ; Rivoire, Olivier ; Smerlak, Matteo ; Zeravcic, Zorana (2021) Natural selection beyond life? A workshop report Life Sciences, 11 (10). p. 1051. ISSN 0024-3205

Hao, Nan ; Agnew, Dylan ; Krishna, Sandeep ; Dodd, Ian B. ; Shearwin, Keith E. (2021) Analysis of infection time courses shows cii levels determine the frequency of lysogeny in phage 186 Pharmaceuticals, 14 (10). p. 998. ISSN 1424-8247

Varahan, Sriram ; Sinha, Vaibhhav ; Walvekar, Adhish ; Krishna, Sandeep ; Laxman, Sunil (2021) Resource plasticity-driven carbon-nitrogen budgeting enables specialization and division of labor in a clonal community elife, 10 . ISSN 2050-084X

Cherian, Philip ; Krishna, Sandeep ; Menon, Gautam I. (2021) Optimizing testing for COVID-19 in India PLoS Computational Biology, 17 (7). e1009126. ISSN 1553-734X

Ameta, Sandeep ; Matsubara, Yoshiya J. ; Chakraborty, Nayan ; Krishna, Sandeep ; Thutupalli, Shashi (2021) Self-reproduction and darwinian evolution in autocatalytic chemical reaction systems Life Sciences, 11 (4). p. 308. ISSN 0024-3205

Heltberg, Mathias L. ; Krishna, Sandeep ; Kadanoff, Leo P. ; Jensen, Mogens H. (2021) A tale of two rhythms: Locked clocks and chaos in biology Cell Systems .

Jeancolas, Cyrille ; Matsubara, Yoshiya J. ; Vybornyi, Mykhailo ; Lambert, Camille N. ; Blokhuis, Alex ; Alline, Thomas ; Griffiths, Andrew D. ; Ameta, Sandeep ; Krishna, Sandeep ; Nghe, Philippe (2021) RNA diversification by a self-reproducing ribozyme revealed by deep sequencing and kinetic modelling Chemical Communications, 57 (61). pp. 7517-7520. ISSN 1359-7345

Varahan, Sriram ; Walvekar, Adhish ; Sinha, Vaibhhav ; Krishna, Sandeep ; Laxman, Sunil (2020) Correction: Metabolic constraints drive self-organization of specialized cell groups elife, 9 . ISSN 2050-084X

Raghunathan, Suchitha ; Chimthanawala, Afroze ; Krishna, Sandeep ; Vecchiarelli, Anthony G. ; Badrinarayanan, Anjana (2020) Asymmetric chromosome segregation and cell division in DNA damage-induced bacterial filaments Molecular Biology of the Cell, 31 (26). pp. 2920-2931. ISSN 1059-1524

Gopalkrishnan, Manoj ; Krishna, Sandeep (2020) Pooling samples to increase SARS-CoV-2 testing Journal of the Indian Institute of Science, 100 (4). pp. 787-792. ISSN 0970-4140

Varahan, Sriram ; Sinha, Vaibhhav ; Walvekar, Adhish ; Krishna, Sandeep ; Laxman, Sunil (2020) Resource plasticity-driven carbon-nitrogen budgeting enables specialization and division of labor in a clonal community elife, 9 . ISSN 2050-084X

Eriksen, Rasmus Skytte ; Krishna, Sandeep (2020) Defence versus growth in a hostile world: lessons from phage and bacteria Royal Society Open Science, 7 (9). ISSN 2054-5703

Krishna, Sandeep ; Laxman, Sunil (2020) Emergence of metabolic heterogeneity in cell populations: lessons from budding yeast Phenotypic Switching . pp. 335-360.

Juul, Jonas S. ; Jensen, Mogens H. ; Krishna, Sandeep (2019) Constraints on somite formation in developing embryos Journal of the Royal Society Interface, 16 (158). p. 20190451. ISSN 1742-5689

Varahan, Sriram ; Walvekar, Adhish ; Sinha, Vaibhhav ; Krishna, Sandeep ; Laxman, Sunil (2019) Metabolic constraints drive self-organization of specialized cell groups elife, 8 . ISSN 2050-084X

Heltberg, Mathias L. ; Krishna, Sandeep ; Jensen, Mogens H. (2019) On chaotic dynamics in transcription factors and the associated effects in differential gene regulation Nature Communications, 10 (1). ISSN 2041-1723

Juul, Jonas S. ; Krishna, Sandeep ; Jensen, Mogens H. (2018) Entrainment as a means of controlling phase waves in populations of coupled oscillators Physical Review E - Statistical, Nonlinear and Soft Matter Physics, 98 (6). ISSN 1539-3755

Krishna, Sandeep ; Laxman, Sunil (2018) A minimal “push–pull” bistability model explains oscillations between quiescent and proliferative cell states Molecular Biology of the Cell, 29 (19). pp. 2243-2258. ISSN 1059-1524

Datta, Vishaka ; Siddharthan, Rahul ; Krishna, Sandeep (2018) Detection of cooperatively bound transcription factor pairs using ChIP-seq peak intensities and expectation maximization PLoS One, 13 (7). e0199771. ISSN 1932-6203

Lal, Avantika ; Krishna, Sandeep ; Seshasayee, Aswin Sai Narain (2018) Regulation of global transcription in escherichia coli by RSD and 6S RNA G3: Genes, Genomes, Genetics, 8 (6). pp. 2079-2089. ISSN 2160-1836

Suratekar, Rohit ; Panda, Aniruddha ; Raghu, Padinjat ; Krishna, Sandeep (2018) Evidence of sinks and sources in the phospholipase C‐activated PIP₂ cycle FEBS Letters, 592 (6). pp. 962-972. ISSN 0014-5793

Sinha, Vaibhhav ; Goyal, Akshit ; Svenningsen, Sine L. ; Semsey, Szabolcs ; Krishna, Sandeep (2017) In silico evolution of lysis-lysogeny strategies reproduces observed lysogeny propensities in temperate bacteriophages Frontiers in Microbiology, 8 . ISSN 1664-302X

Heltberg, Mathias L. ; Krishna, Sandeep ; Jensen, Mogens H. (2017) Time correlations in mode hopping of coupled oscillators Journal of Statistical Physics, 167 (3-4). pp. 792-805. ISSN 0022-4715

Heltberg, Mathias ; Kellogg, Ryan A. ; Krishna, Sandeep ; Tay, Savaş ; Jensen, Mogens H. (2016) Noise induces hopping between NF-κB entrainment modes Cell Systems, 3 (6). 532-539.e3. ISSN 2405-4712

Moss Bendtsen, Kristian ; Jensen, Mogens H. ; Krishna, Sandeep ; Semsey, Szabolcs (2015) The role of mRNA and protein stability in the function of coupled positive and negative feedback systems in eukaryotic cells Scientific Reports, 5 (1). ISSN 2045-2322

Heilmann, Silja ; Krishna, Sandeep ; Kerr, Benjamin (2015) Why do bacteria regulate public goods by quorum sensing?â€”How the shapes of cost and benefit functions determine the form of optimal regulation Frontiers in Microbiology, 6 . ISSN 1664-302X

Hansen, Sabine ; Krishna, Sandeep ; Semsey, Szabolcs ; Lo Svenningsen, Sine (2015) Effects of four different regulatory mechanisms on the dynamics of gene regulatory cascades Scientific Reports, 5 (1). ISSN 2045-2322

Sneppen, Kim ; Semsey, Szabolcs ; Seshasayee, Aswin S. N. ; Krishna, Sandeep (2015) Restriction modification systems as engines of diversity Frontiers in Microbiology, 6 . ISSN 1664-302X

Hao, Nan ; Krishna, Sandeep ; Ahlgren-Berg, Alexandra ; Cutts, Erin E. ; Shearwin, Keith E. ; Dodd, Ian B. (2014) Road rules for traffic on DNA—systematic analysis of transcriptional roadblocking in vivo Nucleic Acids Research, 42 (14). pp. 8861-8872. ISSN 0305-1048

Semsey, Szabolcs ; Krishna, Sandeep (2014) Combining theory and experiments to understand sugar regulation in bacteria Current Chemical Biology, 7 (3). pp. 224-233. ISSN 2212-7968

Sipos, Lilla ; Mengel Pers, Benedicte ; Kalmár, Magda ; Tóth, Ildikó ; Krishna, Sandeep ; Jensen, Mogens H. ; Semsey, Szabolcs (2013) Comparative Network Analysis of Preterm vs. Full-Term Infant-Mother Interactions PLoS One, 8 (6). e67183. ISSN 1932-6203

Singh, Shalini ; Samal, Areejit ; Giri, Varun ; Krishna, Sandeep ; Raghuram, Nandula ; Jain, Sanjay (2013) Flux-based classification of reactions reveals a functional bow-tie organization of complex metabolic networks Physical Review E - Statistical, Nonlinear and Soft Matter Physics, 87 (5). ISSN 1539-3755

Semsey, S. ; Jauffred, L. ; Csiszovszki, Z. ; Erdossy, J. ; Steger, V. ; Hansen, S. ; Krishna, S. (2013) The effect of LacI autoregulation on the performance of the lactose utilization system in Escherichia coli Nucleic Acids Research, 41 (13). pp. 6381-6390. ISSN 0305-1048

Srinivasan, Rajalakshmi ; Chandraprakash, Deepti ; Krishnamurthi, Revathy ; Singh, Parul ; Scolari, Vittore F. ; Krishna, Sandeep ; Seshasayee, Aswin Sai Narain (2013) Genomic analysis reveals epistatic silencing of “expensive” genes in Escherichia coli K-12 Molecular BioSystems, 9 (8). p. 2021. ISSN 1742-206X

Mengel Pers, Benedicte ; Krishna, Sandeep ; Chakraborty, Sagar ; Pigolotti, Simone ; Sekara, Vedran ; Semsey, Szabolcs ; Jensen, Mogens H. (2012) Effects of growth and mutation on pattern formation in tissues PLoS One, 7 (11). e48772. ISSN 1932-6203

Chakraborty, Sagar ; Jensen, Mogens H. ; Krishna, Sandeep ; Mengel Pers, Benedicte ; Pigolotti, Simone ; Sekara, Vedran ; Semsey, Szabolcs (2012) Limit-cycle oscillations and stable patterns in repressor lattices Physical Review E - Statistical, Nonlinear and Soft Matter Physics, 86 (3). ISSN 1539-3755

Li, Weihan ; Krishna, Sandeep ; Pigolotti, Simone ; Mitarai, Namiko ; Jensen, Mogens H. (2012) Switching between oscillations and homeostasis in competing negative and positive feedback motifs Journal of Theoretical Biology, 307 . pp. 205-210. ISSN 0022-5193

Heilmann, Silja ; Sneppen, Kim ; Krishna, Sandeep (2012) Coexistence of phage and bacteria on the boundary of self-organized refuges Proceedings of the National Academy of Sciences of the United States of America, 109 (31). pp. 12828-12833. ISSN 0027-8424

Seshasayee, Aswin Sai Narain ; Singh, Parul ; Krishna, Sandeep (2012) Context-dependent conservation of DNA methyltransferases in bacteria Nucleic Acids Research, 40 (15). pp. 7066-7073. ISSN 1362-4962

Jensen, Mogens H. ; Krishna, Sandeep (2012) Inducing phase‐locking and chaos in cellular oscillators by modulating the driving stimuli FEBS Letters, 586 (11). pp. 1664-1668. ISSN 0014-5793

Mengel, Benedicte ; Krishna, Sandeep ; Jensen, Mogens H. ; Trusina, Ala (2012) Nested feedback loops in gene regulation Physica A: Statistical Mechanics and its Applications, 391 (1-2). pp. 100-106. ISSN 0378-4371

Pedersen, Lykke ; Jensen, Mogens Høgh ; Krishna, Sandeep (2011) Dickkopf1 - A New Player in Modelling the Wnt Pathway PLoS One, 6 (10). e25550. ISSN 1932-6203

Csiszovszki, Zsolt ; Krishna, Sandeep ; Orosz, László ; Adhya, Sankar ; Semsey, Szabolcs (2011) Structure and function of the d-Galactose network in enterobacteria mBio, 2 (4). ISSN 2150-7511

Yde, Pernille ; Mengel, Benedicte ; Jensen, Mogens H ; Krishna, Sandeep ; Trusina, Ala (2011) Modeling the NF-κB mediated inflammatory response predicts cytokine waves in tissue BMC Systems Biology, 5 (1). ISSN 1752-0509

Bendtsen, Kristian Moss ; Erdőssy, János ; Csiszovszki, Zsolt ; Svenningsen, Sine Lo ; Sneppen, Kim ; Krishna, Sandeep ; Semsey, Szabolcs (2011) Direct and indirect effects in the regulation of overlapping promoters Nucleic Acids Research, 39 (16). pp. 6879-6885. ISSN 0305-1048

Avlund, Mikkel ; Krishna, Sandeep ; Semsey, Szabolcs ; Dodd, Ian B. ; Sneppen, Kim (2010) Minimal gene regulatory circuits for a lysis-lysogeny choice in the presence of noise PLoS One, 5 (12). e15037. ISSN 1932-6203

Mengel, Benedicte ; Hunziker, Alexander ; Pedersen, Lykke ; Trusina, Ala ; Jensen, Mogens H ; Krishna, Sandeep (2010) Modeling oscillatory control in NF-κB, p53 and Wnt signaling Current Opinion in Genetics & Development, 20 (6). pp. 656-664. ISSN 0959-437X

Horváth, Péter ; Hunziker, Alexander ; Erdőssy, János ; Krishna, Sandeep ; Semsey, Szabolcs (2010) Timing of gene transcription in the galactose utilization system of escherichia coli Journal of Biological Chemistry, 285 (49). pp. 38062-38068. ISSN 0021-9258

Sneppen, Kim ; Pedersen, Steen ; Krishna, Sandeep ; Dodd, Ian ; Semsey, Szabolcs (2010) Economy of operon formation: cotranscription minimizes shortfall in protein complexes mBio, 1 (4). ISSN 2150-7511

Hunziker, Alexander ; Jensen, Mogens H ; Krishna, Sandeep (2010) Stress-specific response of the p53-Mdm2 feedback loop BMC Systems Biology, 4 (1). ISSN 1752-0509

Hunziker, Alexander ; Tuboly, Csaba ; Horváth, Péter ; Krishna, Sandeep ; Semsey, Szabolcs (2010) Genetic flexibility of regulatory networks Proceedings of the National Academy of Sciences of the United States of America, 107 (29). pp. 12998-13003. ISSN 0027-8424

Ferkinghoff-Borg, Jesper ; Fonslet, Jesper ; Andersen, Christian Beyschau ; Krishna, Sandeep ; Pigolotti, Simone ; Yagi, Hisashi ; Goto, Yuji ; Otzen, Daniel ; Jensen, Mogens H. (2010) Stop-and-go kinetics in amyloid fibrillation Physical Review E - Statistical, Nonlinear and Soft Matter Physics, 82 (1). ISSN 1539-3755

Sneppen, Kim ; Krishna, Sandeep ; Semsey, Szabolcs (2010) Simplified models of biological networks Annual Review of Biophysics, 39 (1). pp. 43-59. ISSN 1936-122X

Heilmann, Silja ; Sneppen, Kim ; Krishna, Sandeep (2010) Sustainability of virulence in a phage-bacterial ecosystem Journal of Virology, 84 (6). pp. 3016-3022. ISSN 0022-538X

Jensen, Peter B. ; Pedersen, Lykke ; Krishna, Sandeep ; Jensen, Mogens H. (2010) A Wnt Oscillator Model for Somitogenesis Biophysical Journal, 98 (6). pp. 943-950. ISSN 0006-3495

Mengel, Benedicte ; Jensen, Mogens ; Krishna, Sandeep ; Trusina, Ala (2010) A20 negative feedback regulates period of NF-KB oscillations Biophysical Journal, 98 (3). 236a. ISSN 0006-3495

Avlund, M. ; Dodd, Ian B. ; Sneppen, K. ; Krishna, S. (2009) Minimal gene regulatory circuits that can count like bacteriophage lambda Journal of Molecular Biology, 394 (4). pp. 681-693. ISSN 0022-2836

Avlund, Mikkel ; Dodd, Ian B. ; Semsey, Szabolcs ; Sneppen, Kim ; Krishna, Sandeep (2009) Why Do Phage Play Dice? Journal of Virology, 83 (22). pp. 11416-11420. ISSN 0022-538X

Jensen, M. H. ; Pigolotti, S. ; Krishna, S. (2009) Genetic oscillation patterns The European Physical Journal Special Topics, 178 (1). pp. 45-56. ISSN 1951-6355

Semsey, Szabolcs ; Benjamin, Julie-Anna M. ; Mitarai, Namiko ; Krishna, Sandeep ; Csiszovszki, Zsolt ; Sneppen, Kim ; Massé, Eric (2009) Dynamics of the recovery from sRNA-mediated gene silencing Cell Cycle, 8 (18). pp. 2863-2864. ISSN 1538-4101

Jensen, Mogens H. ; Krishna, Sandeep ; Pigolotti, Simone (2009) Repressor lattice: feedback, commensurability, and dynamical frustration Physical Review Letters, 103 (11). ISSN 0031-9007

Krishna, Sandeep ; Orosz, László ; Sneppen, Kim ; Adhya, Sankar ; Semsey, Szabolcs (2009) Relation of intracellular signal levels and promoter activities in the gal regulon of escherichia coli Journal of Molecular Biology, 391 (4). pp. 671-678. ISSN 0022-2836

Semsey, Szabolcs ; Krishna, Sandeep ; Erdőssy, János ; Horváth, Péter ; Orosz, László ; Sneppen, Kim ; Adhya, Sankar (2009) Dominant negative autoregulation limits steady-state repression levels in gene networks Journal of Bacteriology, 191 (14). pp. 4487-4491. ISSN 0021-9193

Mitarai, Namiko ; Benjamin, Julie-Anna M. ; Krishna, Sandeep ; Semsey, Szabolcs ; Csiszovszki, Zsolt ; Massé, Eric ; Sneppen, Kim (2009) Dynamic features of gene expression control by small regulatory RNAs Proceedings of the National Academy of Sciences, India - Part B: Biological Sciences, 106 (26). pp. 10655-10659. ISSN 0073-6600

Maslov, Sergei ; Krishna, Sandeep ; Pang, Tin Yau ; Sneppen, Kim (2009) Toolbox model of evolution of prokaryotic metabolic networks and their regulation Proceedings of the National Academy of Sciences of the United States of America, 106 (24). pp. 9743-9748. ISSN 0027-8424

Krishna, S ; Semsey, S ; Jensen, M H (2009) Frustrated bistability as a means to engineer oscillations in biological systems Physical Biology, 6 (3). 036009. ISSN 1478-3967

Werner, Maria ; Semsey, Szabolcs ; Sneppen, Kim ; Krishna, Sandeep (2009) Dynamics of uptake and metabolism of small molecules in cellular response systems PLoS One, 4 (3). e4923. ISSN 1932-6203

Pigolotti, Simone ; Krishna, Sandeep ; Jensen, Mogens H. (2009) Symbolic dynamics of biological feedback networks Physical Review Letters, 102 (8). ISSN 0031-9007

Axelsen, Jacob Bock ; Krishna, Sandeep ; Sneppen, Kim (2008) The cost and capacity of signaling in the escherichia coli protein reaction network Journal of Statistical Mechanics: Theory and Experiment, 2008 (01). P01018. ISSN 1742-5468

Krishna, Sandeep ; Semsey, Szabolcs ; Sneppen, Kim (2007) Combinatorics of feedback in cellular uptake and metabolism of small molecules Proceedings of the National Academy of Sciences of the United States of America, 104 (52). pp. 20815-20819. ISSN 0027-8424

Mitarai, Namiko ; Andersson, Anna M C ; Krishna, Sandeep ; Semsey, Szabolcs ; Sneppen, Kim (2007) Efficient degradation and expression prioritization with small RNAs Physical Biology, 4 (3). pp. 164-171. ISSN 1478-3967

FONSLET, JESPER ; RUD-PETERSEN, KRISTIAN ; KRISHNA, SANDEEP ; JENSEN, MOGENS H. (2007) Pulses and chaos: dynamical response in a simple genetic oscillator International Journal of Modern Physics B, 21 (23n24). pp. 4083-4090. ISSN 0217-9792

Semsey, Szabolcs ; Krishna, Sandeep ; Sneppen, Kim ; Adhya, Sankar (2007) Signal integration in the galactose network of Escherichia coli Molecular Microbiology, 65 (2). pp. 465-476. ISSN 0950-382X

Tiana, G ; Krishna, S ; Pigolotti, S ; Jensen, M H ; Sneppen, K (2007) Oscillations and temporal signalling in cells Physical Biology, 4 (2). R1-R17. ISSN 1478-3967

Pigolotti, Simone ; Krishna, Sandeep ; Jensen, Mogens H. (2007) Oscillation patterns in negative feedback loops Proceedings of the National Academy of Sciences of the United States of America, 104 (16). pp. 6533-6537. ISSN 0027-8424

Krishna, Sandeep ; Maslov, Sergei ; Sneppen, Kim (2007) UV-induced mutagenesis in escherichia coli sos response: A quantitative model PLoS Computational Biology, 3 (3). e41. ISSN 1553-734X

Rosvall, Martin ; Dodd, Ian B. ; Krishna, Sandeep ; Sneppen, Kim (2006) Network models of phage-bacteria coevolution Physical Review E - Statistical, Nonlinear and Soft Matter Physics, 74 (6). ISSN 1539-3755

Semsey, Szabolcs ; Andersson, Anna M. C. ; Krishna, Sandeep ; Jensen, Mogens Høgh ; Massé, Eric ; Sneppen, Kim (2006) Genetic regulation of fluxes: iron homeostasis of Escherichia coli Nucleic Acids Research, 34 (17). pp. 4960-4967. ISSN 0305-1048

Krishna, Sandeep ; Jensen, Mogens H. ; Sneppen, Kim (2006) Minimal model of spiky oscillations in NF-κB signaling Proceedings of the National Academy of Sciences of the United States of America, 103 (29). pp. 10840-10845. ISSN 0027-8424

Krishna, S. (2006) Structure and function of negative feedback loops at the interface of genetic and metabolic networks Nucleic Acids Research, 34 (8). pp. 2455-2462. ISSN 0305-1048

Jain, Sanjay ; Krishna, Sandeep (2002) Crashes, recoveries, and “core shifts” in a model of evolving networks Physical Review Letters . ISSN 0031-9007

Jain, Sanjay ; Krishna, Sandeep (2001) A model for the emergence of cooperation, interdependence, and structure in evolving networks Proceedings of the National Academy of Sciences of the United States of America (PNAS), 98 (2). pp. 543-547. ISSN 0027-8424

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