An algorithm to find similar internal sequence repeats

Banerjee, Nirjhar ; Chidambarathanu, N. ; Sabarinathan, R. ; Michael, Daliah ; Vasuki Ranjani, C. ; Balakrishnan, N. ; Sekar, K. (2009) An algorithm to find similar internal sequence repeats Current Science, 97 (9). pp. 1345-1349. ISSN 0011-3891

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In recent years, identification of sequence patterns has been given immense importance to understand better their significance with respect to genomic organization and evolutionary processes. To this end, an algorithm has been derived to identify all similar sequence repeats present in a protein sequence. The proposed algorithm is useful to correlate the three-dimensional structure of various similar sequence repeats available in the Protein Data Bank against the same sequence repeats present in other databases like SWISS-PROT, PIR and Genome databases.

Item Type:Article
Source:Copyright of this article belongs to Current Science Association.
Keywords:Amino Acid Substitution; Evolutionary Divergence; Protein Sequence; Three-dimensional Structures
ID Code:64428
Deposited On:10 Oct 2011 07:38
Last Modified:18 May 2016 12:51

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