PAN-INDIA 1000 SARS-CoV-2 RNA Genome Sequencing Reveals Important Insights into the Outbreak

Maitra, Arindam ; Raghav, Sunil ; Dalal, Ashwin ; Ali, Farhan ; Paynter, Vanessa Molin ; Paul, Dhiraj ; Biswas, Nidhan K ; Ghosh, Arup ; Jani, Kunal ; Chinnaswamy, Sreedhar ; Pati, Sanghamitra ; Sahu, Arvind ; Mitra, Debashis ; Bhat, Manoj Kumar ; Mayor, Satyajit ; Sarin, Apurva ; Sauche, Yogesh S. ; Seshasayee, Aswin Sai Narain ; Palakodeti, Dasaradhi ; Bashyam, Murali D. ; Parida, Ajay ; Das, Saumitra (2020) PAN-INDIA 1000 SARS-CoV-2 RNA Genome Sequencing Reveals Important Insights into the Outbreak Biorxiv .

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Official URL: http://doi.org/10.1101/2020.08.03.233718

Related URL: http://dx.doi.org/10.1101/2020.08.03.233718

Abstract

The PAN-INDIA 1000 SARS-CoV-2 RNA Genome Sequencing Consortium has achieved its initial goal of completing the sequencing of 1000 SARS-CoV-2 genomes from nasopharyngeal and oropharyngeal swabs collected from individuals testing positive for COVID-19 by Real Time PCR. The samples were collected across 10 states covering different zones within India. Given the importance of this information for public health response initiatives investigating transmission of COVID-19, the sequence data is being released in GISAID database. This information will improve our understanding on how the virus is spreading, ultimately helping to interrupt the transmission chains, prevent new cases of infection, and provide impetus to research on intervention measures. This will also provide us with information on evolution of the virus, genetic predisposition (if any) and adaptation to human hosts.

Item Type:Article
Source:Copyright of this article belongs to Cold Spring Harbor Laboratory.
ID Code:123278
Deposited On:13 Sep 2021 06:24
Last Modified:13 Sep 2021 06:24

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