Molecular force spectroscopy of kinetochore-microtubule attachment in silico : Mechanical signatures of an unusual catch bond and collective effects

Ghanti, Dipanwita ; Patra, Shubhadeep ; Chowdhury, Debashish (2018) Molecular force spectroscopy of kinetochore-microtubule attachment in silico : Mechanical signatures of an unusual catch bond and collective effects Physical Review E, 97 (5). ISSN 2470-0045

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Official URL: http://doi.org/10.1103/PhysRevE.97.052414

Related URL: http://dx.doi.org/10.1103/PhysRevE.97.052414

Abstract

Measurement of the lifetime of attachments formed by a single microtubule (MT) with a single kinetochore (kt) in vitro under force-clamp conditions had earlier revealed a catch-bond-like behavior. In the past, the physical origin of this apparently counterintuitive phenomenon was traced to the nature of the force dependence of the (de)polymerization kinetics of the MTs. Here, first the same model MT-kt attachment is subjected to external tension that increases linearly with time until rupture occurs. In our force-ramp experiments in silico, the model displays the well known “mechanical signatures” of a catch bond probed by molecular force spectroscopy. Exploiting this evidence, we have further strengthened the analogy between MT-kt attachments and common ligand-receptor bonds in spite of the crucial differences in their underlying physical mechanisms. We then extend the formalism to model the stochastic kinetics of an attachment formed by a bundle of multiple parallel microtubules with a single kt considering the effect of rebinding under force-clamp and force-ramp conditions. From numerical studies of the model we predict the trends of variation of the mean lifetime and mean rupture force with the increasing number of MTs in the bundle. Both the mean lifetime and the mean rupture force display nontrivial nonlinear dependence on the maximum number of MTs that can attach simultaneously to the same kt.

Item Type:Article
Source:Copyright of this article belongs to American Physical Society
ID Code:131624
Deposited On:07 Dec 2022 09:42
Last Modified:07 Dec 2022 09:42

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