Items where Author is "Srinivasan, N."

Article

Chawla, Bhavna ; Kumar, Ravi Ranjan ; Tyagi, Nidhi ; Subramanian, Gowri ; Srinivasan, N. ; Park, Myung Hee ; Madhubala, Rentala (2012) A unique modification of the eukaryotic initiation factor 5A shows the presence of the complete hypusine pathway in leishmania donovani PLoS One, 7 (3). e33138. ISSN 1932-6203

Chawla, Bhavna ; Jhingran, Anupam ; Singh, Sushma ; Tyagi, Nidhi ; Park, Myung Hee ; Srinivasan, N. ; Roberts, Sigrid C. ; Madhubala, Rentala (2010) Identification and characterization of a novel deoxyhypusine synthase in Leishmania donovani Journal of Biological Chemistry, 285 . pp. 453-463. ISSN 0021-9258

Aggarwal, Pooja ; Das Gupta, Mainak ; Joseph, Agnel Praveen ; Chatterjee, Nirmalya ; Srinivasan, N. ; Nath, Utpal (2010) Identification of Specific DNA Binding Residues in the TCP Family of Transcription Factors in Arabidopsis Plant Cell, 22 (4). pp. 1174-1189. ISSN 1040-4651

Ratha, Jyoti ; Gowri, V. S. ; Chauhan, Swati C. ; Padmanabhan, Prasad K. ; Srinivasan, N. ; Madhubala, Rentala (2009) A glutathione-specific aldose reductase of Leishmania donovani and its potential implications for methylglyoxal detoxification pathway Gene, 429 (1-2). pp. 1-9. ISSN 0378-1119

Tyagi, M. ; Brevern, A. G. de. ; Srinivasan, N. ; Offmann, B. (2008) Protein structure mining using a structural alphabet Proteins: Structure, Function, and Bioinformatics, 71 (2). pp. 920-937. ISSN 0887-3585

Srinivasan, N. ; Prasad, Y. V. R. K. ; Rama Rao, P. (2008) Hot deformation behaviour of Mg-3Al alloy-A study using processing map Materials Science and Engineering: A, 476 (1-2). pp. 146-156. ISSN 0921-5093

Thangudu, Ratna R. ; Manoharan, Malini ; Srinivasan, N. ; Frédéric, Cadet ; Sowdhamini, R. ; Offmann, Bernard (2008) Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families BMC Structural Biology, 8 . pp. 55_1-55_22. ISSN 1472-6807

Ramakrishnan, C. ; Lakshmi, B. ; Kurien, A. ; Devipriya, D. ; Srinivasan, N. (2007) Structural compromise of disallowed conformations in peptide and protein structures Protein and Peptide Letters, 14 (7). pp. 672-682. ISSN 0929-8665

Bhadra, R. ; Sandhya, S. ; Abhinandan, K. R. ; Chakrabarti, S. ; Sowdhamini, R. ; Srinivasan, N. (2006) Cascade PSI-BLAST web server: a remote homology search tool for relating protein domains Nucleic Acids Research, 34 (S-2). pp. W143-W146. ISSN 0305-1048

Pugalenthi, G. ; Shameer, K. ; Srinivasan, N. ; Sowdhamini, R. (2006) HARMONY: a server for the assessment of protein structures Nucleic Acids Research, 34 (S-2). pp. W231-W234. ISSN 0305-1048

Gadkari, R. A. ; Roy, S. ; Rekha, N. ; Srinivasan, N. ; Dighe, R. R. (2005) Identification of a heterodimer-specific epitope present in human chorionic gonadotrophin (hCG) using a monoclonal antibody that can distinguish between hCG and human LH Journal of Molecular Endocrinology, 34 . pp. 879-887. ISSN 0952-5041

Chakrabarti, S. ; Abhinandan, K. R. ; Sowdhamini, R. ; Srinivasan, N. ; Sandhya, S. (2005) Assessment of a rigorous transitive profile based search method to detect remotely similar proteins Journal of Biomolecular Structure and Dynamics, 23 (3). pp. 283-298. ISSN 0739-1102

Shenoy, Avinash R. ; Sivakumar, K. ; Krupa, A. ; Srinivasan, N. ; Visweswariah, Sandhya S. (2004) A survey of nucleotide cyclases in actinobacteria: unique domain organization and expansion of the class III cyclase family in Mycobacterium tuberculosis Comparative and Functional Genomics, 5 (1). pp. 17-38. ISSN 1531-6912

Singh, Sunanda R. ; Rekha, Nambudiry ; Pillai, Beena ; Singh, Vijender ; Naorem, Aruna ; Sampath, Vinaya ; Srinivasan, N. ; Sadhale, Parag P. (2004) Domainal organization of the lower eukaryotic homologs of the yeast RNA polymerase II core subunit Rpb7 reflects functional conservation Nucleic Acids Research, 32 (1). pp. 201-210. ISSN 0305-1048

Pandit, Shashi B. ; Srinivasan, N. (2004) Identification and analysis of a new family of bacterial serine proteinases In Silico Biology, 4 (4). pp. 563-572. ISSN 1386-6338

Sampath, Vinaya ; Rekha, Nambudiry ; Srinivasan, N. ; Sadhale, Parag (2003) The conserved and non-conserved regions of Rpb4 are involved in multiple phenotypes in Saccharomyces cerevisiae Journal of Biological Chemistry, 278 (51). pp. 51566-51576. ISSN 0021-9258

Sandhya, S. ; Kishore, S. ; Sowdhamini, R. ; Srinivasan, N. (2003) Effective detection of remote homologues by searching in sequence dataset of a protein domain fold FEBS Letters, 552 (2-3). pp. 225-230. ISSN 0014-5793

Shenoy, Avinash R. ; Srinivasan, N. ; Subramaniam, M. ; Visweswariah, Sandhya S. (2003) Mutational analysis of the mycobacterium tuberculosis Rv1625c adenylyl cyclase: residues that confer nucleotide specificity contribute to dimerization FEBS Letters, 545 (2-3). pp. 253-259. ISSN 0014-5793

Sopory, Shailaja ; Balaji, S. ; Srinivasan, N. ; Visweswariah, Sandhya S. (2003) Modeling and mutational analysis of the GAF domain of the cGMP-binding, cGMP-specific phosphodiesterase, PDE5 FEBS Letters, 539 (1-3). pp. 161-166. ISSN 0014-5793

Rahaman, Abdur ; Srinivasan, N. ; Shamala, N. ; Shaila, M. S. (2003) The fusion core complex of the Peste des petits ruminants is a six-helix bundle assembly Biochemistry, 42 (4). pp. 922-931. ISSN 0006-2960

Eswar, Narayanan ; Ramakrishnan, C. ; Srinivasan, N. (2003) Stranded in isolation: structural role of isolated extended strands in proteins Protein Engineering, 16 (5). pp. 331-339. ISSN 0269-2139

Eswar, Narayanan ; Nagarajaram, H. A. ; Ramakrishnan, C. ; Srinivasan, N. (2002) Influence of solvent molecules on the stereochemical code of glycyl residues in proteins Proteins: Structure, Function, and Bioinformatics, 49 (3). pp. 326-334. ISSN 0887-3585

Pandit, Shashi B. ; Gosar, Dilip ; Abhiman, S. ; Sujatha, S. ; Dixit, Sayali S. ; Mhatre, Natasha S. ; Sowdhamini, R. ; Srinivasan, N. (2002) SUPFAM-a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and function annotation in genomes Nucleic Acids Research, 30 (1). pp. 289-293. ISSN 0305-1048

Bhandari, Rashna ; Srinivasan, N. ; Mahaboobi ; Ghanekar, Yashoda ; Suguna, K. ; Sandhya S. Visweswariah* (2001) Functional inactivation of the human guanylyl cyclase C receptor:  modeling and mutation of the protein kinase-like domain Biochemistry, 40 (31). pp. 9196-9206. ISSN 0006-2960

Vijayachandra, K. ; Guruprasad, M. ; Bhandari, Rashna ; Manjunath, U. H. ; Somesh, B. P. ; Srinivasan, N. ; Suguna, K. ; Visweswariah, Sandhya S. (2000) Biochemical characterization of the intracellular domain of the human guanylyl cyclase C receptor provides evidence for a catalytically active homotrimer Biochemistry, 39 (51). pp. 16075-16083. ISSN 0006-2960

Lindsey-Boltz, L. A. ; Chawla, G. ; Srinivasan, N. ; Vijayraghavan, U. ; Garcia-Blanco, M. A. (2000) The carboxy terminal WD domain of the pre-mRNA splicing factor Prp17p is critical for function RNA, 6 . pp. 1289-1305. ISSN 1355-8382

Sowdhamini, R. ; Burke, D. F. ; Deane, C. ; Huang, J. ; Mizuguchi, K. ; Nagarajaram, H. A. ; Overington, J. P. ; Srinivasan, N. ; Steward, R. E. ; Blundell, T. L. (1998) Protein three-dimensional structural databases: domains, structurally aligned homologues and superfamilies Acta Crystallographica Section D, D54 (6). pp. 1168-1177. ISSN 0907-4449

Sowdhamini, R. ; Burke, David F. ; Huang, Jing-fei ; Mizuguchi, Kenji ; Nagarajaram, Hampapathalu A. ; Srinivasan, N. ; Steward, Robert E. ; Blundell, Tom L. (1998) CAMPASS: a database of structurally aligned protein superfamilies Structure, 6 (9). pp. 1087-1094. ISSN 0969-2126

Ramakrishnan, C. ; Srinivasan, N. ; Nataraj, D. V. (1996) Motifs and conformational analysis of amino acid residues adjoining β-turns in proteins International Journal of Peptide and Protein Research, 48 (5). pp. 420-428. ISSN 0367-8377

Nataraj, D. V. ; Srinivasan, N. ; Sowdhamini, R. ; Ramakrishnan, C. (1995) α-Turns in protein structure Current Science, 69 (5). pp. 434-447. ISSN 0011-3891

Sowdhamini, R. ; Srinivasan, N. ; Guruprasad, K. ; Rufino, S. ; Dhanaraj, V. ; Wood, S. P. ; Emsley, J. ; White, H. E. ; Blundell, Tom (1995) Protein three-dimensional structure and molecular recognition: a story of soft locks and keys Pharmaceutica Acta Helvetiae, 69 (4). pp. 185-192. ISSN 0031-6865

Donate, Luis Enrique ; Srinivasan, N. ; Sowdhamini, R. ; Gherardi, Ermanno ; Blundell, Tom L. ; Aparicio, Samuel (1994) Molecular evolution and domain structure of plasminogen-related growth factors (HGF/SF and HGF1/MSP) Protein Science, 3 (12). pp. 2378-2394. ISSN 0961-8368

Srinivasan, N. ; Prasad, Y. V. R. K. (1994) Microstructural control in hot working of IN-718 superalloy using processing map Metallurgical and Materials Transactions A, 25A (10). pp. 2275-2284. ISSN 1073-5623

Srinivasan, N. ; Anuradha, V. S. ; Ramakrishnan, C. ; Sowdhamini, R. ; Balaram, P. (1993) Conformational characteristics of asparaginyl residues in proteins International Journal of Peptide and Protein Research, 44 (2). pp. 112-122. ISSN 0367-8377

Ramakrishnan, C. ; Srinivasan, N. (1993) Conformational preference of glycyl residues in proteins. A further confirmaiton Proceedings of the Indian National Science Academy - Part B: Biological Sciences, 59 (1). pp. 45-54. ISSN 0073-6600

Sowdhamini, R. ; Srinivasan, N. ; Ramakrishnan, C. ; Balaram, P. (1992) Orthogonal ββ motifs in proteins Journal of Molecular Biology, 223 (4). pp. 845-851. ISSN 0022-2836

Srinivasan, N. ; Sowdhamini, Ramanathan ; Ramakrishnan, Chandrashekharan ; Balaram, Padmanabhan (1991) Analysis of short loops connecting secondary structural elements in proteins Molecular Conformation and Biological Interactions . pp. 59-73.

Ramakrishnan, C. ; Srinivasan, N. (1990) Glycyl residues in proteins and peptides: an analysis Current Science, 59 (17-18). pp. 851-862. ISSN 0011-3891

Srinivasan, N. ; Sowdhamini, R. ; Ramakrishnan, C. ; Balaram, P. (1990) Conformations of disulfide bridges in proteins International Journal of Peptide and Protein Research, 36 (2). pp. 147-155. ISSN 0367-8377

Sowdhamini, R. ; Srinivasan, N. ; Shoichet, Brian ; Santi, Daniel V. ; Ramakrishnan, C. ; Balaram, P. (1989) Stereochemical modeling of disulfide bridges. Criteria for introduction into proteins by site-directed mutagenesis Protein Engineering Design & Selection, 3 (2). pp. 95-103. ISSN 1741-0126

Ramakrishnan, C. ; Srinivasan, N. ; Prashanth, D. (1987) Conformation of glycyl residues in globular proteins International Journal of Peptide and Protein Research, 29 (5). pp. 629-637. ISSN 0367-8377