Items where Author is "Sharma, Deepak"

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Mohanty, Sanjay Kumar ; Mittal, Aayushi ; Farooqi, Namra ; Gaur, Aakash ; Duari, Subhadeep ; Solanki, Saveena ; Sharma, Anmol Kumar ; Arora, Sakshi ; Kumar, Suvendu ; Gautam, Vishakha ; Dixit, Nilesh Kumar ; Subramanian, Karthika ; Ghosh, Tarini Shankar ; Sengupta, Debarka ; Gupta, Shashi Kumar ; Murugan, Arul Natarajan ; Sharma, Deepak ; Ahuja, Gaurav (2025) Deep learning reveals endogenous sterols as allosteric modulators of the GPCR–Gα interface elife, 14 . ISSN 2050-084X

Singh, Prateek ; Ujjainiya, Rajat ; Prakash, Satyartha ; Naushin, Salwa ; Sardana, Viren ; Bhatheja, Nitin ; Singh, Ajay Pratap ; Barman, Joydeb ; Kumar, Kartik ; Gayali, Saurabh ; Khan, Raju ; Rawat, Birendra Singh ; Tallapaka, Karthik Bharadwaj ; Anumalla, Mahesh ; Lahiri, Amit ; Kar, Susanta ; Bhosale, Vivek ; Srivastava, Mrigank ; Mugale, Madhav Nilakanth ; Pandey, C.P. ; Khan, Shaziya ; Katiyar, Shivani ; Raj, Desh ; Ishteyaque, Sharmeen ; Khanka, Sonu ; Rani, Ankita ; Promila ; Sharma, Jyotsna ; Seth, Anuradha ; Dutta, Mukul ; Saurabh, Nishant ; Veerapandian, Murugan ; Venkatachalam, Ganesh ; Bansal, Deepak ; Gupta, Dinesh ; Halami, Prakash M. ; Peddha, Muthukumar Serva ; Veeranna, Ravindra P. ; Pal, Anirban ; Singh, Ranvijay Kumar ; Anandasadagopan, Suresh Kumar ; Karuppanan, Parimala ; Rahman, Syed Nasar ; Selvakumar, Gopika ; Venkatesan, Subramanian ; Karmakar, Malay Kumar ; Sardana, Harish Kumar ; Kothari, Anamika ; Parihar, Devendra Singh ; Thakur, Anupma ; Saifi, Anas ; Gupta, Naman ; Singh, Yogita ; Reddu, Ritu ; Gautam, Rizul ; Mishra, Anuj ; Mishra, Avinash ; Gogeri, Iranna ; Rayasam, Geethavani ; Padwad, Yogendra ; Patial, Vikram ; Hallan, Vipin ; Singh, Damanpreet ; Tirpude, Narendra ; Chakrabarti, Partha ; Maity, Sujay Krishna ; Ganguly, Dipyaman ; Sistla, Ramakrishna ; Balthu, Narender Kumar ; A, Kiran Kumar ; Ranjith, Siva ; Kumar, B. Vijay ; Jamwal, Piyush Singh ; Wali, Anshu ; Ahmed, Sajad ; Chouhan, Rekha ; Gandhi, Sumit G. ; Sharma, Nancy ; Rai, Garima ; Irshad, Faisal ; Jamwal, Vijay Lakshmi ; Paddar, Masroor Ahmad ; Khan, Sameer Ullah ; Malik, Fayaz ; Ghosh, Debashish ; Thakkar, Ghanshyam ; Barik, S.K. ; Tripathi, Prabhanshu ; Satija, Yatendra Kumar ; Mohanty, Sneha ; Khan, Md. Tauseef ; Subudhi, Umakanta ; Sen, Pradip ; Kumar, Rashmi ; Bhardwaj, Anshu ; Gupta, Pawan ; Sharma, Deepak ; Tuli, Amit ; Ray chaudhuri, Saumya ; Krishnamurthi, Srinivasan ; Prakash, L. ; Rao, Ch V. ; Singh, B.N. ; Chaurasiya, Arvindkumar ; Chaurasiyar, Meera ; Bhadange, Mayuri ; Likhitkar, Bhagyashree ; Mohite, Sharada ; Patil, Yogita ; Kulkarni, Mahesh ; Joshi, Rakesh ; Pandya, Vaibhav ; Mahajan, Sachin ; Patil, Amita ; Samson, Rachel ; Vare, Tejas ; Dharne, Mahesh ; Giri, Ashok ; Mahajan, Sachin ; Paranjape, Shilpa ; Sastry, G. Narahari ; Kalita, Jatin ; Phukan, Tridip ; Manna, Prasenjit ; Romi, Wahengbam ; Bharali, Pankaj ; Ozah, Dibyajyoti ; Sahu, Ravi Kumar ; Dutta, Prachurjya ; Singh, Moirangthem Goutam ; Gogoi, Gayatri ; Tapadar, Yasmin Begam ; Babu, Elapavalooru VSSK. ; Sukumaran, Rajeev K. ; Nair, Aishwarya R. ; Puthiyamadam, Anoop ; Valappil, Prajeesh Kooloth ; Pillai Prasannakumari, Adrash Velayudhan ; Chodankar, Kalpana ; Damare, Samir ; Agrawal, Ved Varun ; Chaudhary, Kumardeep ; Agrawal, Anurag ; Sengupta, Shantanu ; Dash, Debasis (2022) A machine learning-based approach to determine infection status in recipients of BBV152 (Covaxin) whole-virion inactivated SARS-CoV-2 vaccine for serological surveys. Computers in Biology and Medicine, 146 . p. 105419. ISSN 0010-4825

Naushin, Salwa ; Sardana, Viren ; Ujjainiya, Rajat ; Bhatheja, Nitin ; Kutum, Rintu ; Bhaskar, Akash Kumar ; Pradhan, Shalini ; Prakash, Satyartha ; Khan, Raju ; Rawat, Birendra Singh ; Tallapaka, Karthik Bharadwaj ; Anumalla, Mahesh ; Chandak, Giriraj Ratan ; Lahiri, Amit ; Kar, Susanta ; Mulay, Shrikant Ramesh ; Mugale, Madhav Nilakanth ; Srivastava, Mrigank ; Khan, Shaziya ; Srivastava, Anjali ; Tomar, Bhawana ; Veerapandian, Murugan ; Venkatachalam, Ganesh ; Vijayakumar, Selvamani Raja ; Agarwal, Ajay ; Gupta, Dinesh ; Halami, Prakash M ; Peddha, Muthukumar Serva ; Sundaram, Gopinath M ; Veeranna, Ravindra P ; Pal, Anirban ; Agarwal, Vinay Kumar ; Maurya, Anil Ku ; Singh, Ranvijay Kumar ; Raman, Ashok Kumar ; Anandasadagopan, Suresh Kumar ; Karuppanan, Parimala ; Venkatesan, Subramanian ; Sardana, Harish Kumar ; Kothari, Anamika ; Jain, Rishabh ; Thakur, Anupama ; Parihar, Devendra Singh ; Saifi, Anas ; Kaur, Jasleen ; Kumar, Virendra ; Mishra, Avinash ; Gogeri, Iranna ; Rayasam, Geethavani ; Singh, Praveen ; Chakraborty, Rahul ; Chaturvedi, Gaura ; Karunakar, Pinreddy ; Yadav, Rohit ; Singhmar, Sunanda ; Singh, Dayanidhi ; Sarkar, Sharmistha ; Bhattacharya, Purbasha ; Acharya, Sundaram ; Singh, Vandana ; Verma, Shweta ; Soni, Drishti ; Seth, Surabhi ; Vashisht, Sakshi ; Thakran, Sarita ; Fatima, Firdaus ; Singh, Akash Pratap ; Sharma, Akanksha ; Sharma, Babita ; Subramanian, Manikandan ; Padwad, Yogendra S ; Hallan, Vipin ; Patial, Vikram ; Singh, Damanpreet ; Tripude, Narendra Vijay ; Chakrabarti, Partha ; Maity, Sujay Krishna ; Ganguly, Dipyaman ; Sarkar, Jit ; Ramakrishna, Sistla ; Kumar, Balthu Narender ; Kumar, Kiran A ; Gandhi, Sumit G ; Jamwal, Piyush Singh ; Chouhan, Rekha ; Jamwal, Vijay Lakshmi ; Kapoor, Nitika ; Ghosh, Debashish ; Thakkar, Ghanshyam ; Subudhi, Umakanta ; Sen, Pradip ; Chaudhury, Saumya Ray ; Kumar, Rashmi ; Gupta, Pawan ; Tuli, Amit ; Sharma, Deepak ; Ringe, Rajesh P ; D, Amarnarayan ; Kulkarni, Mahesh ; Shanmugam, Dhansekaran ; Dharne, Mahesh S ; Dastager, Sayed G ; Joshi, Rakesh ; Patil, Amita P ; Mahajan, Sachin N ; Khan, Abujunaid Habib ; Wagh, Vasudev ; Yadav, Rakesh Kumar ; Khilari, Ajinkya ; Bhadange, Mayuri ; Chaurasiya, Arvindkumar H ; Kulsange, Shabda E ; Khairnar, Krishna ; Paranjape, Shilpa ; Kalita, Jatin ; Sastry, Narahari G ; Phukan, Tridip ; Manna, Prasenjit ; Romi, Wahengbam ; Bharali, Pankaj ; Ozah, Dibyajyoti ; Sahu, Ravi Kumar ; Babu, Elapavalooru VSSK ; Sukumaran, Rajeev ; Nair, Aiswarya R ; Valappil, Prajeesh Kooloth ; Puthiyamadam, Anoop ; Velayudhanpillai, Adarsh ; Chodankar, Kalpana ; Damare, Samir ; Madhavi, Yennapu ; Aggarwal, Ved Varun ; Dahiya, Sumit ; Agrawal, Anurag ; Dash, Debasis ; Sengupta, Shantanu (2021) Insights from a Pan India Sero-Epidemiological survey (Phenome-India Cohort) for SARS-CoV2. elife, 10 . ISSN 2050-084X

Sil, Anomitra ; Wagh, Aditya A. ; Sharma, Deepak ; Ranjan, Rajeev ; Anil Kumar, P. S. (2017) On the inter-layer magneto-electric coupling in BiFeO₃/SrRuO₃ heterostructure Applied Physics Letters, 111 (10). p. 102902. ISSN 0003-6951

Sharma, Deepak ; Priyadarshini, Pragya ; Vrati, Sudhanshu ; Goff, S. P. (2015) Unraveling the Web of Viroinformatics: Computational Tools and Databases in Virus Research Journal of Virology, 89 (3). pp. 1489-1501. ISSN 0022-538X

Saha, Piyali ; Bhattacharyya, Sanchari ; Kesavardhana, Sannula ; Miranda, Edward Roshan ; Shaik Syed Ali, P. ; Sharma, Deepak ; Varadarajan, Raghavan (2012) Designed cyclic permutants of HIV-1 gp120: implications for envelope trimer structure and immunogen design Biochemistry, 51 (9). pp. 1836-1847. ISSN 0006-2960

Sharma, Deepak ; Surolia, Avadhesha (2011) Computational tools to study and understand the intricate biology of mycobacteria Tuberculosis, 91 (3). pp. 273-276. ISSN 1472-9792

Chauhan, Santosh ; Sharma, Deepak ; Singh, Alka ; Surolia, Avadhesha ; Tyagi, Jaya Sivaswami (2011) Comprehensive insights into Mycobacterium tuberculosis DevR (DosR) regulon activation switch Nucleic Acids Research . No pp. given. ISSN 0305-1048

Sharma, Deepak ; Deb, Kalyanmoy ; Kishore, N. N. (2011) Domain-specific initial population strategy for compliant mechanisms using customized genetic algorithm Structural and Multidisciplinary Optimization, 43 (4). pp. 541-554. ISSN 1615-147X

De Majumdar, Shyamasree ; Sharma, Deepak ; Vashist, Atul ; Kaur, Kohinoor ; Taneja, Neetu Kumra ; Chauhan, Santosh ; Challu, Vijay K. ; Ramanathan, V. D. ; Balasangameshwara, V. ; Kumar, Prahlad ; Tyagi, Jaya Sivaswami (2010) Co-expression of DevR and DevR_N-Aph proteins is associated with hypoxic adaptation defect and virulence attenuation of Mycobacterium tuberculosis PloS One, 5 (2). pp. e9448_1-e9448_6. ISSN 1932-6203

Sharma, Deepak ; Mohanty, Debasisa ; Surolia, Avadhesha (2009) RegAnalyst: a web interface for the analysis of regulatory motifs, networks and pathways Nucleic Acids Research, 37 (Suppl. 2). pp. W193-W201. ISSN 0305-1048

Deb, Kalyanmoy ; Miettinen, Kaisa ; Sharma, Deepak (2009) A hybrid integrated multi-objective optimization procedure for estimating nadir point Lecture Notes in Computer Science, 5467 . pp. 569-583. ISSN 0302-9743

Sharma, Deepak ; Deb, Kalyanmoy ; Kishore, N. N. (2008) A domain-specific crossover and a helper objective for generating minimum weight compliant mechanisms Proceedings of Genetic and Evolutionary Computation conference (GECCO-2008), (Atlanta, USA) . pp. 1723-1724.

Sharma, Deepak ; Tyagi, Jaya Sivaswami (2007) The value of comparative genomics in understanding mycobacterial virulence: Mycobacterium tuberculosis H37Ra genome sequencing — a worthwhile endeavour Journal of Biosciences, 32 (2). pp. 185-189. ISSN 0250-5991

Sharma, Deepak ; Bose, Arpita ; Shakila, H. ; Das, Taposh K. ; Tyagi, Jaya Sivaswami ; Ramanathan, V. D. (2006) Expression of mycobacterial cell division protein, FtsZ, and dormancy proteins, DevR and Acr, within lung granulomas throughout guinea pig infection FEMS Immunology & Medical Micribiology, 48 (3). pp. 329-336. ISSN 0928-8244

Sharma, Deepak ; Balamurali, M. M. ; Chakraborty, Kausik ; Kumaran, Sowmini ; Jeganathan, Sadasivam ; Rashid, Umar ; Ingallinella, Paolo ; Varadarajan, Raghavan (2005) Protein minimization of the gp120 binding region of human CD4 Biochemistry, 44 (49). pp. 16192-16202. ISSN 0006-2960

Bagchi, Gargi ; Chauhan, Santosh ; Sharma, Deepak ; Tyagi, Jaya Sivaswami (2005) Transcription and autoregulation of the Rv3134c-devR-devS operon of Mycobacterium tuberculosis Microbiology, 151 (12). pp. 4045-4053. ISSN 1350-0872

Varadarajan, Raghavan ; Sharma, Deepak ; Chakraborty, Kausik ; Patel, Mayuri ; Citron, Michael ; Sinha, Prem ; Yadav, Ramkishor ; Rashid, Umar ; Kennedy, Sarah ; Eckert, Debra ; Geleziunas, Romas ; Bramhill, David ; Schleif, William ; Liang, Xiaoping ; Shiver, John (2005) Characterization of gp120 and its single-chain derivatives, gp120-CD4_D12 and gp120-M9: implications for targeting the CD4_i epitope in human immunodeficiency virus vaccine design Journal of Virology, 79 (3). pp. 1713-1723. ISSN 0022-538X

Kamal, Neel ; Chowdhury, Shantanu ; Madan, Taruna ; Sharma, Deepak ; Attreyi, M. ; Haq, Wahajul ; Katti, Seturam Bandacharya ; Kumar, Anil ; Sarma, P. Usha (2005) Tryptophan residue is essential for immunoreactivity of a diagnostically relevant peptide epitope of A. fumigatus Molecular and Cellular Biochemistry, 275 (1). pp. 223-231. ISSN 0300-8177

Sharma, Deepak ; Issac, Biju ; Raghava, G. P. S. ; Ramaswamy, R. (2004) Spectral repeat finder (SRF): identification of repetitive sequences using Fourier transformation Bioinformatics, 20 (9). pp. 1405-1412. ISSN 1367-4803

Malhotra, Vandana ; Sharma, Deepak ; Ramanathan, V. D. ; Shakila, H. ; Saini, Deepak K. ; Chakravorty, Soumitesh ; Das, Taposh K. ; Li, Qing ; Silver, Richard F. ; Narayanan, P. R. ; Tyagi, Jaya Sivaswami (2004) Disruption of response regulator gene, devR, leads to attenuation in virulence of Mycobacterium tuberculosis FEMS Microbiology Letters, 231 (2). pp. 237-245. ISSN 0378-1097

Tyagi, Jaya Sivaswami ; Sharma, Deepak (2004) Signal transduction systems of mycobacteria with special reference to M. tuberculosis Current Science, 86 (1). pp. 93-102. ISSN 0011-3891

Tyagi, Jaya Sivaswami ; Sharma, Deepak (2002) Mycobacterium smegmatis and tuberculosis Trends in Microbiology, 10 (2). pp. 68-69. ISSN 0966-842X

Brahmachari, Samir K. ; Sharma, Deepak ; Sharma, Sunitha ; Pasha, Santosh ; Sen, Somdatta ; Saleem, Quasar (2000) Probing the polyglutamine puzzle in neurological disorders FEBS Letters, 472 (1). pp. 167-168. ISSN 0014-5793

Brahmachari, Samir K. ; Sharma, Deepak ; Sharma, Sunita ; Pasha, Santosh (1999) Peptide models for inherited neurodegenerative disorders: conformation and aggregation properties of long polyglutamine peptides with and without interruptions FEBS Letters, 456 (1). pp. 181-185. ISSN 0014-5793