Items where Author is "Bhattacharya, Alok"

Awasthi, Kapila ; Srivastava, Alok ; Bhattacharya, Sudha ; Bhattacharya, Alok (2021) Tissue specific expression of sialic acid metabolic pathway: role in GNE myopathy Journal of Muscle Research and Cell Motility, 42 (1). pp. 99-116. ISSN 0142-4319

Pinotsis, Nikos ; Zielinska, Karolina ; Babuta, Mrigya ; Arolas, Joan L. ; Kostan, Julius ; Khan, Muhammad Bashir ; Schreiner, Claudia ; Salmazo, Anita ; Ciccarelli, Luciano ; Puchinger, Martin ; Gkougkoulia, Eirini A. ; Ribeiro, Euripedes de Almeida ; Marlovits, Thomas C. ; Bhattacharya, Alok ; Djinovic-Carugo, Kristina (2020) Calcium modulates the domain flexibility and function of an α-actinin similar to the ancestral α-actinin PNAS, 117 (36). pp. 22101-22112. ISSN 0027-8424

Srivastava, Ankita ; Bhattacharya, Alok ; Bhattacharya, Sudha ; Jhingan, Gagan Deep (2016) Identification of EhTIF-IA: the putative E. histolytica orthologue of the human ribosomal RNA transcription initiation factor-IA Journal of Biosciences, 41 (1). pp. 51-62. ISSN 0250-5991

Mansuri, M Shahid ; Babuta, Mrigya ; Ali, Mohammad Sabir ; Bharadwaj, Ravi ; jhingan, Gagan Deep ; Gourinath, Samudrala ; Bhattacharya, Sudha ; Bhattacharya, Alok (2016) Autophosphorylation at Thr279 of Entamoeba histolytica atypical kinase EhAK1 is required for activity and regulation of erythrophagocytosis Scientific Reports, 6 . Article ID 16969, 11 pages. ISSN 2045-2322

Das, Sarbashis ; Pettersson, B. M. Fredrik ; Behra, Phani Rama Krishna ; Ramesh, Malavika ; Dasgupta, Santanu ; Bhattacharya, Alok ; Kirsebom, Leif A. (2016) The Mycobacterium phlei genome: expectations and surprises Genome Biology and Evolution, 8 (4). pp. 975-985. ISSN 1759-6653

Saha, Arpita ; Bhattacharya, Sudha ; Bhattacharya, Alok (2016) Serum stress responsive gene EhslncRNA of Entamoeba histolytica is a novel long noncoding RNA Scientific Reports, 6 . Article ID 27476, 9 pages. ISSN 2045-2322

Saha, Arpita ; Gaurav, Amit Kumar ; Bhattacharya, Sudha ; Bhattacharya, Alok (2015) Molecular basis of pathogenesis in amoebiasis Current Clinical Microbiology Reports, 2 (4). pp. 143-154. ISSN 2196-5471

Ahamad, Jamaluddin ; Ojha, Sandeep ; Srivastava, Ankita ; Bhattacharya, Alok ; Bhattacharya, Sudha (2015) Post-transcriptional regulation of ribosomal protein genes during serum starvation in Entamoeba histolytica Molecular and Biochemical Parasitology, 201 (2). pp. 146-152. ISSN 0166-6851

Roychowdhury, Tanmoy ; Mandal, Saurav ; Bhattacharya, Alok (2015) Analysis of IS6110 insertion sites provide a glimpse into genome evolution of Mycobacterium tuberculosis Scientific Reports, 5 . Article ID 12567, 10 pages. ISSN 2045-2322

Das, Sarbashis ; Pettersson, B. M. Fredrik ; Behra, Phani Rama Krishna ; Ramesh, Malavika ; Dasgupta, Santanu ; Bhattacharya, Alok ; Kirsebom, Leif A. (2015) Characterization of three Mycobacterium spp. with potential use in bioremediation by genome sequencing and comparative genomics Genome Biology and Evolution, 7 (7). pp. 1871-1886. ISSN 1759-6653

Babuta, Mrigya ; Mansuri, M Shahid ; Bhattacharya, Sudha ; Bhattacharya, Alok (2015) The Entamoeba histolytica, Arp2/3 complex is recruited to phagocytic cups through an atypical kinase EhAK1 PLoS Pathogens, 11 (12). Article ID e1005310, 27 pages. ISSN 1553-7366

Kumar, Sanjeev ; Aslam, Saima ; Mazumder, Mohit ; Dahiya, Pradeep ; Murmu, Aruna ; Manjasetty, Babu A. ; Zaidi, Rana ; Bhattacharya, Alok ; Gourinath, S. (2014) Crystal structure of calcium binding protein-5 from Entamoeba histolytica and its involvement in initiation of phagocytosis of human erythrocytes PLoS Pathogens, 10 (12). pp. Article ID e1004532-14 pages. ISSN 1553-7374

Saha, Arpita ; Bhattacharya, Sudha ; Bhattacharya, Alok (2014) Regulation of serum-responsive transmembrane kinase EhTMKB1-9 by an unsaturated lipid, oleic acid in protistan parasite Entamoeba histolytica Molecular and Biochemical Parasitology, 198 (1). pp. 48-57. ISSN 0166-6851

Petri, William A. ; Mansuri, Shahid M. ; Bhattacharya, Sudha ; Bhattacharya, Alok (2014) A novel alpha kinase EhAK1 phosphorylates actin and regulates phagocytosis in Entamoeba histolytica PLoS Pathogens, 10 (10). Article ID e1004411, 22 pages. ISSN 1553-7366

Ahmad, Hafiz M. ; Muiwo, Pamchui ; Ramachandran, Suganthi S. ; Pandey, Priyatama ; Gupta, Yogendra K. ; Kumar, Lalit ; Kulshreshtha, Ritu ; Bhattacharya, Alok (2014) miR-22 regulates expression of oncogenic neuro-epithelial transforming gene 1, NET1 The FEBS Journal, 281 (17). pp. 3904-3919. ISSN 1742-464X

Ojha, Sandeep ; Ahamad, Jamaluddin ; Bhattacharya, Alok ; Bhattacharya, Sudha (2014) Ribosomal RNA and protein transcripts persist in the cysts of Entamoeba invadens Molecular and Biochemical Parasitology, 195 (1). pp. 6-9. ISSN 0166-6851

Ralston, Katherine S. ; Solga, Michael D. ; Mackey-Lawrence, Nicole M. ; Somlata ; Bhattacharya, Alok ; Petri Jr., William A. (2014) Trogocytosis by Entamoeba histolytica contributes to cell killing and tissue invasion Nature, 508 . pp. 526-530. ISSN 0028-0836

Mazumder, Mohit ; Padhan, Narendra ; Bhattacharya, Alok ; Gourinath, Samudrala (2014) Prediction and analysis of canonical EF hand loop and qualitative estimation of Ca²⁺ binding affinity PLoS ONE, 9 (4). Article ID e96202, 10 pages. ISSN 1932-6203

Srivastava, Ankita ; Ahamad, Jamaluddin ; Ray, Ashwini Kumar ; Kaur, Devinder ; Bhattacharya, Alok ; Bhattacharya, Sudha (2014) Analysis of U3 snoRNA and small subunit processome components in the parasitic protist Entamoeba histolytica Molecular and Biochemical Parasitology, 193 (2). pp. 82-92. ISSN 0166-6851

Pettersson, Fredrik B. M. ; Behra, Krishna P. R. ; Manduva, Satyam ; Das, Sarbashis ; Dasgupta, Santanu ; Bhattacharya, Alok ; Kirsebom, Leif A. (2014) Draft genome sequence of Saccharopolyspora rectivirgula Genome Announcements, 2 (1). Article ID e01117, 2 pages. ISSN 2169-8287

Grewal, Jaspreet Singh ; Padhan, Narendra ; Aslam, Saima ; Bhattacharya, Alok ; Lohia, Anuradha (2013) The calcium binding protein EhCaBP6 is a microtubular-end binding protein in Entamoeba histolytica Cellular Microbiology, 15 (12). pp. 2020-2033. ISSN 1462-5814

Ojha, Sandeep ; Singh, Nishant ; Bhattacharya, Alok ; Bhattacharya, Sudha (2013) The ribosomal RNA transcription unit of Entamoeba invadens: accumulation of unprocessed pre-rRNA and a long non coding RNA during encystation Molecular and Biochemical Parasitology, 192 (1-2). pp. 30-38. ISSN 0166-6851

Vaz, Candida ; Ahmad, Hafiz M. ; Bharti, Richa ; Pandey, Priyatama ; Kumar, Lalit ; Kulshreshtha, Ritu ; Bhattacharya, Alok (2013) Analysis of the microRNA transcriptome and expression of different isomiRs in human peripheral blood mononuclear cells BMC Research Notes, 6 . Article ID 390, 12 pages. ISSN 1756-0500

Rout, Ashok K. ; Patel, Sunita ; Somlata, . ; Shukla, Manish ; Saraswathi, Deepa ; Bhattacharya, Alok ; Chary, Kandala V. R. (2013) Functional manipulation of a calcium-binding protein from Entamoeba histolytica guided by paramagnetic NMR Journal of Biological Chemistry, 288 . pp. 23473-23487. ISSN 0021-9258

Pettersson, B. M. Fredrik ; Nitharwal, Ram G. ; Das, Sarbashis ; Behra, Krishna P. R. ; Benedik, Evgen ; Arasu, Uma T. ; Islam, Nurul M. ; Dasgupta, Santanu ; Bhattacharya, Alok ; Kirsebom, Leif A. (2013) Identification and expression of stressosomal proteins in Mycobacterium marinumunder various growth and stress conditions FEMS Microbiology Letters, 342 (2). pp. 98-105. ISSN 0378-1097

Kaur, Charanpreet ; Vishnoi, Anchal ; Ariyadasa, Thilini Udayangani ; Bhattacharya, Alok ; Singla-Pareek, Sneh Lata ; Sopory, Sudhir Kumar (2013) Episodes of horizontal gene-transfer and gene-fusion led to co-existence of different metal-ion specific glyoxalase I Scientific Reports, 3 . Article ID 3076, 10 pages. ISSN 2045-2322

Das, Sarbashis ; Roychowdhury, Tanmoy ; Kumar, Parameet ; Kumar, Anil ; Kalra, Priya ; Singh, Jitendra ; Singh, Sarman ; Prasad, H. K. ; Bhattacharya, Alok (2013) Genetic heterogeneity revealed by sequence analysis of Mycobacterium tuberculosis isolates from extra-pulmonary tuberculosis patients BMC Genomics, 14 . Article ID 404, 14 pages. ISSN 1471-2164

Kumari, Vandana ; Iyer, Lakshmi ; Roy, Riti ; Bhargava, Varsha ; Panda, Suchita ; Paul, Jaishree ; Verweij, Jaco J. ; Clark, C. ; Bhattacharya, Alok ; Bhattacharya, Sudha (2013) Genomic distribution of SINEs in Entamoeba histolytica strains: implication for genotyping BMC Genomics, 14 (1). Article ID 432, 14 pages. ISSN 1471-2164

Singh, Nishant ; Bhattacharya, Alok ; Bhattacharya, Sudha (2013) Homologous recombination occurs in entamoeba and is enhanced during growth stress and stage conversion PLoS One, 8 (9). Article ID e74465, 9 pages. ISSN 1932-6203

Roychowdhury, Tanmoy ; Vishnoi, Anchal ; Bhattacharya, Alok (2013) Next-generation anchor based phylogeny (NexABP): constructing phylogeny from next-generation sequencing data Scientific Reports, 3 . Article ID 2634, 7 pages. ISSN 2045-2322

Hon, Chung-Chau ; Weber, Christian ; Sismeiro, Odile ; Proux, Caroline ; Koutero, Mikael ; Deloger, Marc ; Das, Sarbashis ; Agrahari, Mridula ; Dillies, Marie-Agnes ; Jagla, Bernd ; Coppee, Jean-Yves ; Bhattacharya, Alok ; Guillen, Nancy (2013) Quantification of stochastic noise of splicing and polyadenylation in Entamoeba histolytica Nucleic Acids Research, 41 (3). pp. 1936-1952. ISSN 0305-1048

Abhyankar, Mayuresh M. ; Shrimal, Shiteshu ; Gilchrist, Carol A. ; Bhattacharya, Alok ; Petri Jr., William A. (2012) The Entamoeba histolytica serum-inducible transmembrane kinase EhTMKB1-9 is involved in intestinal amebiasis International Journal for Parasitology: Drugs and Drug Resistance, 2 . pp. 243-248. ISSN 2211-3207

Sibley, L. David ; Aslam, Saima ; Bhattacharya, Sudha ; Bhattacharya, Alok (2012) The calmodulin-like calcium binding protein EhCaBP3 of Entamoeba histolytica regulates phagocytosis and is involved in actin dynamics PLoS Pathogens, 8 (12). Article ID e1003055, 14 pages. ISSN 1553-7374

Singh, Nishant ; Ojha, Sandeep ; Bhattacharya, Alok ; Bhattacharya, Sudha (2012) Stable transfection and continuous expression of heterologous genes in Entamoeba invadens Molecular and Biochemical Parasitology, 184 (1). pp. 9-12. ISSN 0166-6851

Singh, Nishant ; Ojha, Sandeep ; Bhattacharya, Alok ; Bhattacharya, Sudha (2012) Establishment of a transient transfection system and expression of firefly luciferase in Entamoeba invadens Molecular and Biochemical Parasitology, 183 (1). pp. 90-93. ISSN 0166-6851

Yadav, Vijay Pal ; Mandal, Prabhat Kumar ; Bhattacharya, Alok ; Bhattacharya, Sudha (2012) Recombinant SINEs are formed at high frequency during induced retrotransposition in vivo Nature Communications, 3 . Article ID 854. ISSN 2041-1723

Shrimal, Shiteshu ; Saha, Arpita ; Bhattacharya, Sudha ; Bhattacharya, Alok (2012) Lipids induce expression of serum-responsive transmembrane kinase EhTMKB1-9 in an early branching eukaryote Entamoeba histolytica Scientific Reports, 2 . Article ID 333, 7 pages. ISSN 2045-2322

Bharti, Richa ; Das, Ram ; Sharma, Pragya ; Katoch, Kiran ; Bhattacharya, Alok (2012) MTCID: a database of genetic polymorphisms in clinical isolates of Mycobacterium tuberculosis Tuberculosis, 92 (2). pp. 166-172. ISSN 1472-9792

Gupta, Abhishek Kumar ; Panigrahi, Sunil Kumar ; Bhattacharya, Alok ; Bhattacharya, Sudha (2012) Self-circularizing 5′-ETS RNAs accumulate along with unprocessed pre ribosomal RNAs in growth-stressed Entamoeba histolytica Scientific Reports, 2 . Article ID 303, 8 pages. ISSN 2045-2322

Kaur, Devinder ; Gupta, Abhishek ; Kumari, Vandana ; Sharma, Rahul ; Bhattacharya, Alok ; Bhattacharya, Sudha (2012) Computational prediction and validation of C/D, H/ACA and Eh_U3 snoRNAs of Entamoeba histolytica BMC Genomics, 13 . Article ID 390, 20 pages. ISSN 1471-2164

Gupta, Rashi ; Dewan, Isha ; Bharti, Richa ; Bhattacharya, Alok (2012) Differential expression analysis for RNA-Seq data ISRN Bioinformatics, 2012 . Article ID 817508, 8 pages. ISSN 2090-7346

Das, Sarbashis ; Duggal, Priyanka ; Roy, Rahul ; Myneedu, Vithal P. ; Behera, Digamber ; Prasad, Hanumanthappa K. ; Bhattacharya, Alok (2012) Identification of hot and cold spots in genome of Mycobacterium tuberculosis using Shewhart control charts Scientific Reports, 2 . Article ID 297, 6 pages. ISSN 2045-2322

Vaz, Candida ; Mer, Arvind Singh ; Bhattacharya, Alok ; Ramaswamy, Ramakrishna (2011) MicroRNAs modulate the dynamics of the NF-κB signaling pathway PLoS One, 6 (11). Article ID e27774. ISSN 1932-6203

Somlata, ; Bhattacharya, Sudha ; Bhattacharya, Alok (2011) A C2 domain protein kinase initiates phagocytosis in the protozoan parasite Entamoeba histolytica Nature Communications, 2 (230). No pp. given.. ISSN 2041-1723

Kumari, Vandana ; Sharma, Rahul ; Yadav, Vijay P. ; Gupta, Abhishek K. ; Bhattacharya, Alok ; Bhattacharya, Sudha (2011) Differential distribution of a SINE element in the Entamoeba histolytica and Entamoeba dispar genomes: role of the LINE-encoded endonuclease BMC Genomics, 12 . pp. 267_1-267_12. ISSN 1471-2164

Shrimal, Shiteshu ; Bhattacharya, Sudha ; Bhattacharya, Alok (2010) Serum-dependent selective expression of EhTMKB1-9, a member of Entamoeba histolytica B1 family of transmembrane kinases PLoS Pathogens, 6 (6). Article ID e1000929, 19 pages. ISSN 1553-7374

Vaz, Candida ; Ahmad, Hafiz M. ; Sharma, Pratibha ; Gupta, Rashi ; Kumar, Lalit ; Kulshreshtha, Ritu ; Bhattacharya, Alok (2010) Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood BMC Genomics, 11 . p. 288. ISSN 1471-2164

Jain, Ruchi ; Shrimal, Shiteshu ; Bhattacharya, Sudha ; Bhattacharya, Alok (2010) Identification and partial characterization of a dynamin-like protein, EhDLP1, from the protist parasite Entamoeba histolytica Eukaryotic Cell, 9 (1). pp. 215-223. ISSN 1535-9778

DeSalle, Robert ; Vishnoi, Anchal ; Roy, Rahul ; Prasad, Hanumanthappa K. ; Bhattacharya, Alok (2010) Anchor-based whole genome phylogeny (ABWGP): a tool for inferring evolutionary relationship among closely related microorganims PLoS One, 5 (11). Article ID e14159, 11 pages. ISSN 1932-6203

Agarwal, Sumeet ; Vaz, Candida ; Bhattacharya, Alok ; Srinivasan, Ashwin (2010) Prediction of novel precursor miRNAs using a Context-Sensitive Hidden Markov Model (CSHMM) BMC Bioinformatics, 11 (Supp 1). Article ID S29, 7 pages. ISSN 1471-2105

Das, Sarbashis ; Yennamalli, Ragothaman M. ; Vishnoi, Anchal ; Gupta, Parul ; Bhattacharya, Alok (2009) Single-nucleotide variations associated with Mycobacterium tuberculosis KwaZulu-Natal strains Journal of Biosciences, 34 (3). pp. 397-404. ISSN 0250-5991

Jhingana, Gagan Deep ; Panigrahia, Sunil K. ; Bhattacharya, Alok ; Bhattacharya, Sudha (2009) The nucleolus in Entamoeba histolytica and entamoeba invadens is located at the nuclear periphery Molecular and Biochemical Parasitology, 167 (1). pp. 72-80. ISSN 0166-6851

Jain, Ruchi ; Kumar, Shivesh ; Gourinath, Samudrala ; Bhattacharya, Sudha ; Bhattacharya, Alok (2009) N- and C-terminal domains of the calcium binding protein EhCaBP1 of the parasite Entamoeba histolytica display distinct functions PLos One, 4 (4). pp. e5269_1-e5269_9. ISSN 1932-6203

Mustafi, Sourajit Mitra ; Mutalik, Ritu Bansal ; Jain, Ruchi ; Chandra, Kousik ; Bhattacharya, Alok ; Chary, Kandala V. R. (2009) Structural characterization of a novel Ca²⁺-binding protein from Entamoeba histolytica: structural basis for the observed functional differences with its isoform Journal of Biological Inorganic Chemistry, 14 (3). pp. 471-483. ISSN 0949-8257

Panigrahi, Sunil K. ; Jhingan, Gagan Deep ; Som, Indrani ; Bhattacharya, Alok ; Petri Jr., William A. ; Bhattacharya, Sudha (2009) Promoter analysis of palindromic transcription units in the ribosomal DNA circle of entamoeba histolytica Eukaryotic Cell, 8 (1). pp. 69-76. ISSN 1535-9778

Das, Sarbashis ; Vishnoi, Anchal ; Bhattacharya, Alok (2009) ABWGAT: anchor-based whole genome analysis tool Bioinformatics, 25 (24). pp. 3319-3320. ISSN 1367-4803

Nandi, Amitabha ; Vaz, Candida ; Bhattacharya, Alok ; Ramaswamy, Ramakrishna (2009) miRNA-regulated dynamics in circadian oscillator models BMC Systems Biology, 3 (1). p. 45. ISSN 1752-0509

Tyagi, Sonika ; Vaz, Candida ; Gupta, Vipin ; Bhatia, Rohit ; Maheshwari, Sachin ; Srinivasan, Ashwin ; Bhattacharya, Alok (2008) CID-miRNA: a web server for prediction of novel miRNA precursors in human genome Biochemical and Biophysical Research Communications, 372 (4). pp. 831-834. ISSN 0006-291X

Arya, Ranjana ; Aslam, Saima ; Gupta, Shivani ; Bora, Roop Singh ; Vijayakrishnan, Lalitha ; Gulati, Pankaj ; Naithani, Sudha ; Mukherjee, Shohini ; Dastidar, Sunanda ; Bhattacharya, Alok ; Saini, Kulvinder Singh (2008) Production and characterization of pharmacologically active recombinant human phosphodiesterase 4B in Dictyostelium discoideum Biotechnology Journal, 3 (7). pp. 938-947. ISSN 1860-6768

Rout, Ashok K. ; Barnwal, Ravi P. ; Padhan, Narendra ; Bhattacharya, Alok ; Chary, Kandala V. R. (2008) Sequence specific ¹H, ¹³C and ¹⁵N resonance assignments of a calmodulin-like calcium-binding protein from the protozoan parasite Entamoeba histolytica (EhCaM) Biomolecular NMR Assignments, 2 (1). pp. 77-79. ISSN 1874-2718

Jain, Ruchi ; Santi-Rocca, Julien ; Padhan, Narendra ; Bhattacharya, Sudha ; Guillen, Nancy ; Bhattacharya, Alok (2008) calcium-binding protein 1 of entamoeba histolytica transiently associates with phagocytic cups in a calcium-independent manner Cellular Microbiology, 10 (6). pp. 1373-1389. ISSN 1462-5814

Weber, Christian ; Blazquez, Samantha ; Marion, Sabrina ; Ausseur, Christophe ; Vats, Divya ; Krzeminski, Mickael ; Rigothier, Marie-Christine ; Maroun, Rachid C. ; Bhattacharya, Alok ; Guillen, Nancy (2008) Bioinformatics and functional analysis of an Entamoeba histolytica mannosyltransferase necessary for parasite complement resistance and hepatical infection PLoS Neglected Tropical Diseases, 2 (2). Article ID e165, 9 pages. ISSN 1935-2735

Agarwal, Subhash M. ; Jain, Ruchi ; Bhattacharya, Alok ; Azam, Amir (2008) Inhibitors of Escherichia coli serine acetyltransferase block proliferation of Entamoeba histolytica trophozoites International Journal for Parasitology, 38 (2). pp. 137-141. ISSN 0020-7519

Jhingran, Anupam ; Padmanabhan, Prasad K. ; Singh, Sushma ; Anamika, Krishanpal ; Bakre, Abhijeet A. ; Bhattacharya, Sudha ; Bhattacharya, Alok ; Srinivasan, Narayanaswamy ; Madhubala, Rentala (2008) Characterization of the Entamoeba histolytica ornithine decarboxylase-like enzyme PLoS Neglected Tropical Diseases, 2 (1). pp. e115_1-e115_10. ISSN 1935-2735

Arya, Ranjana ; Bhattacharya, Alok ; Saini, Kulvinder Singh (2008) Dictyostelium discoideum—a promising expression system for the production of eukaryotic proteins The FASEB Journal, 22 (12). pp. 4055-4066. ISSN 0892-6638

Vishnoi, Anchal ; Srivastava, Alok ; Roy, Rahul ; Bhattacharya, Alok (2008) MGDD: Mycobacterium tuberculosis genome divergence database BMC Genomics, 9 (1). pp. 373_1-373_4. ISSN 1471-2164

Oswal, Nupur ; Sahni, Narinder Singh ; Bhattacharya, Alok ; Komath, Sneha Sudha ; Muthuswami, Rohini (2008) Unique motifs identify PIG-A proteins from glycosyltransferases of the GT4 family BMC Evolutionary Biology, 8 . Article ID 168, 14 pages. ISSN 1471-2148

Pandey, Girdhar K. ; Pandey, Amita ; Reddy, Vanga Siva ; Deswal, Renu ; Bhattacharya, Alok ; Upadhyaya, Kailash C. ; Sopory, Sudhir K. (2007) Antisense expression of a gene encoding a calcium-binding protein in transgenic tobacco leads to altered morphology and enhanced chlorophyll Journal of Biosciences, 32 (2). pp. 251-260. ISSN 0250-5991

Hirata, Ken K. ; Que, Xuchu ; Melendez-Lopez, Samuel G. ; Debnath, Anjan ; Myers, Simona ; Herdman, D. Scott ; Orozco, Esther ; Bhattacharya, Alok ; McKerrow, James H. ; Reed, Sharon L. (2007) A phagocytosis mutant of Entamoeba histolytica is less virulent due to deficient proteinase expression and release Experimental Parasitology, 115 (2). pp. 192-199. ISSN 0014-4894

Vishnoi, Anchal ; Roy, Rahul ; Bhattacharya, Alok (2007) Comparative analysis of bacterial genomes: identification of divergent regions in mycobacterial strains using an anchor-based approach Nucleic Acids Research, 35 (11). pp. 3654-3667. ISSN 0305-1048

Mehra, Alka ; Bhattacharya, Sudha ; Bhattacharya, Alok (2007) Identification and functional characterization of a novel lysine-rich protein from entamoeba histolytica American Journal of Biochemistry and Biotechnology, 3 (4). pp. 193-198. ISSN 1553-3468

Mehra, Alka ; Fredrick, Jesse ; Petri Jr., William A. ; Bhattacharya, Sudha ; Bhattacharya, Alok (2006) Expression and function of a family of transmembrane kinases from the protozoan parasite Entamoeba histolytica Infection and Immunity, 74 (9). pp. 5341-5351. ISSN 0019-9567

Vishwakarma, Ram A. ; Anand, Monica T. ; Arya, Ranjana ; Vats, Divya ; Bhattacharya, Alok (2006) Glycosylated inositol phospholipid from Entamoeba histolytica: identification and structural characterization Molecular and Biochemical Parasitology, 145 (1). pp. 121-124. ISSN 0166-6851

Mandal, Prabhat K. ; Rawal, Kamal ; Ramaswamy, Ram ; Bhattacharya, Alok ; Bhattacharya, Sudha (2006) Identification of insertion hot spots for non-LTR retrotransposons: computational and biochemical application to entamoeba histolytica Nucleic Acids Research, 34 (20). pp. 5752-5763. ISSN 0305-1048

Vats, Divya ; Vishwakarma, Ram A. ; Bhattacharya, Sudha ; Bhattacharya, Alok (2005) Reduction of cell surface glycosylphosphatidylinositol conjugates in entamoeba histolytica by antisense blocking of E. histolytica GlcNAc-phosphatidylinositol deacetylase expression: effect on cell proliferation, endocytosis, and adhesion to target cells Infection and Immunity, 73 (12). pp. 8381-8392. ISSN 0019-9567

Bakre, Abhijeet A. ; Rawal, Kamal ; Ramaswamy, Ram ; Bhattacharya, Alok ; Bhattacharya, Sudha (2005) The LINEs and SINEs of Entamoeba histolytica: comparative analysis and genomic distribution Experimental Parasitology, 110 (3). pp. 207-213. ISSN 0014-4894

Loftus, Brendan ; Anderson, Iain ; Davies, Rob ; Cecilia, U. ; Alsmark, M. ; son, John Samuel ; Amedeo, Paolo ; Roncaglia, Paola ; Berriman, Matt ; Hirt, Robert P. ; Mann, Barbara J. ; Nozaki, Tomo ; Suh, Bernard ; Pop, Mihai ; Duchene, Michael ; Ackers, John ; Tannich, Egbert ; Leippe, Matthias ; Hofer, Margit ; Bruchhaus, Iris ; Willhoeft, Ute ; Bhattacharya, Alok ; Chillingworth, Tracey ; Churcher, Carol ; Hance, Zahra ; Harris, Barbara ; Harris, David ; Jagels, Kay ; Moule, Sharon ; Mungall, Karen ; Ormond, Doug ; Squares, Rob ; Whitehead, Sally ; Quail, Michael A. ; Rabbinowitsch, Ester ; Norbertczak, Halina ; Price, Claire ; Wang, Zheng ; Guillén, Nancy ; Gilchrist, Carol ; Stroup, Suzanne E. ; Bhattacharya, Sudha ; Lohia, Anuradha ; Foster, Peter G. ; Sicheritz-Ponten, Thomas ; Weber, Christian ; Singh, Upinder ; Mukherjee, Chandrama ; El-Sayed, Najib M. ; Petri Jr., William A. ; Clark, C. Graham ; Embley, T. Martin ; Barrell, Bart ; Fraser, Claire M. ; Hall, Neil (2005) The genome of the protist parasite entamoeba histolytica Nature, 433 . pp. 865-868. ISSN 0028-0836

Nandi, Soumyadeep ; Mehra, Nipun ; Lynn, Andrew M. ; Bhattacharya, Alok (2005) Comparison of theoretical proteomes: identification of COGs with conserved and variable pI within the multimodal pI distribution BMC Genomics, 6 . Article ID 116, 12 pages. ISSN 1471-2164

Gourinath, S. ; Padhan, Narendra ; Alam, Neelima ; Bhattacharya, Alok (2005) Crystallization and preliminary crystallographic analysis of calcium-binding protein-2 from Entamoeba histolytica and its complexes with strontium and the IQ1 motif of myosin V Acta Crystallographica Section F, F61 . pp. 417-420. ISSN 1744-3091

Sahoo, Nivedita ; Labruyère, Elisabeth ; Bhattacharya, Sudha ; Sen, P. ; Guillèn, Nancy ; Bhattacharya, Alok (2004) Calcium binding protein 1 of the protozoan parasite Entamoeba histolytica interacts with actin and is involved in cytoskeleton dynamics Journal of Cell Science, 117 . pp. 3625-3634. ISSN 0021-9533

Mandal, Prabhat K. ; Bagchi, Anindya ; Bhattacharya, Alok ; Bhattacharya, Sudha (2004) An entamoeba histolytica LINE/SINE pair inserts at common target sites cleaved by the restriction enzyme-like LINE-encoded endonuclease Eukaryotic Cell, 3 (1). pp. 170-179. ISSN 1535-9778

Chakrabarty, Paramita ; Sethi, Dhruv K. ; Padhan, Narendra ; Kaur, Kanwal J. ; Salunke, Dinakar M. ; Bhattacharya, Sudha ; Bhattacharya, Alok (2004) Identification and characterization of EhCaBP2: a second member of the calcium-binding protein family of the protozoan parasite entamoeba histolytica Journal of Biological Chemistry, 279 (13). pp. 12898-12908. ISSN 0021-9258

Satish, S. ; Bakre, Abhijeet A. ; Bhattacharya, Sudha ; Bhattacharya, Alok (2003) Stress-dependent expression of a polymorphic, charged antigen in the protozoan parasite entamoeba histolytica Infection and Immunity, 71 (8). pp. 4472-4486. ISSN 0019-9567

Bhattacharya, Alok ; Bhattacharya, Sudha ; Ackers, John P. (2003) Nontranslated polyadenylated RNAs from entamoeba histolytica Trends in Parasitology, 19 (7). pp. 286-289. ISSN 1471-4922

Sahoo, Nivedita ; Bhattacharya, Sudha ; Bhattacharya, Alok (2003) Blocking the expression of a calcium binding protein of the protozoan parasite entamoeba histolytica by tetracycline regulatable antisense-RNA Molecular and Biochemical Parasitology, 126 (2). pp. 281-284. ISSN 0166-6851

Arya, Ranjana ; Mehra, Alka ; Bhattacharya, Sudha ; Vishwakarmac, Ram A. ; Bhattacharya, Alok (2003) Biosynthesis of entamoeba histolytica proteophosphoglycan in vitro Molecular and Biochemical Parasitology, 126 (1). pp. 1-8. ISSN 0166-6851

Ghosh, Soma ; Satish, S. ; Tyagi, Sonika ; Bhattacharya, Alok ; Bhattacharya, Sudha (2003) Differential use of multiple replication origins in the ribosomal DNA episome of the protozoan parasite entamoeba histolytica Nucleic Acids Research, 31 (8). pp. 2035-2044. ISSN 0305-1048

Reddi, Honey ; Bhattacharya, Alok ; Kumar, Vijay (2002) The calcium-binding protein of Entamoeba histolytica as a fusion partner for expression of peptides in Escherichia coli Biotechnology and Applied Biochemistry, 36 (3). pp. 213-218. ISSN 0885-4513

Paul, Jaishree ; Bhattacharya, Alok ; Bhattacharya, Sudha (2002) Close sequence identity between ribosomal DNA episomes of the non-pathogenic entamoeba dispar and pathogenicEntamoeba histolytica Journal of Biosciences, 27 (6). pp. 619-627. ISSN 0250-5991

Bhattacharya, Sudha ; Bakre, Abhijeet ; Bhattacharya, Alok (2002) Mobile genetic elements in protozoan parasites Journal of Genetics, 81 (2). pp. 73-86. ISSN 0022-1333

Bhattacharya, Sudha ; Bhattacharya, Alok ; Petri Jr., William A. (2002) Examining entamoeba Trends in Parasitology, 18 (5). pp. 196-197. ISSN 1471-4922

Pandey, Giridhar K. ; Reddy, Vanga S. ; Reddy, Malireddy K. ; Deswal, Renu ; Bhattacharya, Alok ; Sopory, Sudhir K. (2002) Transgenic tobacco expressing Entamoeba histolytica calcium binding protein exhibits enhanced growth and tolerance to salt stress Plant Science, 162 (1). pp. 41-47. ISSN 0168-9452

Sharma, Rachna ; Bagchi, Anindya ; Bhattacharya, Alok ; Bhattacharya, Sudha (2001) Characterization of a retrotransposon-like element from entamoeba histolytica Molecular and Biochemical Parasitology, 116 (1). pp. 45-53. ISSN 0166-6851

Lynn, Andrew M. ; Jain, Chakresh Kumar ; Kosalai, K. ; Barman, Pranjan ; Thakur, Nupur ; Batra, Harish ; Bhattacharya, Alok (2001) An automated annotation tool for genomic DNA sequences using GeneScan and BLAST Journal of Genetics, 80 (1). pp. 9-16. ISSN 0022-1333

Sharma, Rachna ; Bagchi, Anindya ; Bhattacharya, Sudha ; Bhattacharya, Alok (2000) Characterization of a retrotransposon-like repetitive DNA in entamoeba histolytica Archives of Medical Research, 31 (4). pp. S266-S268. ISSN 0188-4409

Sahoo, Nivedita ; Chakrabarty, Paramita ; Yadava, Nagendra ; Bhattacharya, Sudha ; Bhattacharya, Alok (2000) Calcium binding protein of Entamoeba histolytica Archives of Medical Research, 31 (4). pp. S57-S59. ISSN 0188-4409

Deswal, Renu ; Pandey, Girdhar K. ; Chandok, Meena Rani ; Yadav, Nagendra ; Bhattacharya, Alok ; Sopory, Sudhir K. (2000) A novel protein kinase from Brassica juncea stimulated by a protozoan calcium binding protein: purification and partial characterization European Journal of Biochemistry, 267 (11). pp. 3181-3189. ISSN 0014-2956

Som, Indrani ; Azam, Amir ; Bhattacharya, Alok ; Bhattacharya, Sudha (2000) Inter- and intra-strain variation in the 5.8S ribosomal RNA and internal transcribed spacer sequences of entamoeba histolytica and comparison with entamoeba dispar, entamoeba moshkovskii and entamoeba invadens International Journal for Parasitology, 30 (6). pp. 723-728. ISSN 0020-7519

Bhattacharya, Alok ; Satish, S. ; Bagchi, Anindya ; Bhattacharya, Sudha (2000) The genome of entamoeba histolytica International Journal for Parasitology, 30 (4). pp. 401-410. ISSN 0020-7519

Moorthy, Anu K. ; Gopal, B. ; Satish, P. R. ; Bhattacharya, Sudha ; Bhattacharya, Alok ; Murthy, M. R. N. ; Surolia, A. (1999) Thermodynamics of target peptide recognition by calmodulin and a calmodulin analogue: implications for the role of the central linker FEBS Letters, 461 (1). pp. 19-24. ISSN 0014-5793

Bagchi, Anindya ; Bhattacharya, Alok ; Bhattacharya, Sudha (1999) Lack of a chromosomal copy of the circular rDNA plasmid of entamoeba histolytica International Journal for Parasitology, 29 (11). pp. 1775-1783. ISSN 0020-7519

Sharma, Rachna ; Azam, Amir ; Bhattacharya, Sudha ; Bhattacharya, Alok (1999) Identification of novel genes of non-pathogenic entamoeba dispar by expressed sequence tag analysis Molecular and Biochemical Parasitology, 99 (2). pp. 279-285. ISSN 0166-6851

Bhattacharya, Alok ; Bhattacharya, Sudha ; Ackers, John P. (1999) Nontranslated polyadenylated ribonucleic acids from the protozoan parasite Entamoeba histolytica Current Science, 77 (4). pp. 564-567. ISSN 0011-3891

Yadava, Nagendra ; Chandok, Meena R. ; Prasad, Jayendra ; Bhattacharya, Sudha ; Soporya, Sudhir K. ; Bhattacharya, Alok (1997) Characterization of EhCaBP, a calcium-binding protein of entamoeba histolytica and its binding proteins Molecular and Biochemical Parasitology, 84 (1). pp. 69-82. ISSN 0166-6851

Tiwari, Shrish ; Ramachandran, S. ; Bhattacharya, Alok ; Bhattacharya, Sudha ; Ramaswamy, Ramakrishna (1997) Prediction of probable genes by fourier analysis of genomic sequences Bioinformatics, 13 (3). pp. 263-270. ISSN 1367-4803

Gopal, B. ; Swaminathan, C. P. ; Bhattacharya, Sudha ; Bhattacharya, Alok ; Murthy, M. R. N. ; Surolia, A. (1997) Thermodynamics of metal ion binding and denaturation of a calcium binding protein from entamoeba histolytica Biochemistry, 36 (36). pp. 10910-10916. ISSN 0006-2960

Sehgal, Devinder ; Bhattacharya, Alok ; Bhattacharya, Sudha (1996) Pathogenesis of infection by entamoeba histolytica Journal of Biosciences, 21 (3). pp. 423-432. ISSN 0250-5991

Srivastava, Gopal ; Anand, Monika Tola. ; Bhattacharya, Sudha ; Bhattacharya, Alok (1995) Lipophosphoglycan is present in distinctly different form in different entamoeba histolytica strains and absent in entamoeba moshkovskii and entamoeba invadens Journal of Eukaryotic Microbiology, 42 (5). pp. 617-622. ISSN 1066-5234

Sehgal, Devinder ; Mittal, Vivek ; Ramachandran, Srinivasan ; Dhar, Suman K. ; Bhattacharya, Alok ; Bhattacharya, Sudha (1994) Nucleotide sequence organisation and analysis of the nuclear ribosomal DNA circle of the protozoan parasite entamoeba histolytica Molecular and Biochemical Parasitology, 67 (2). pp. 205-214. ISSN 0166-6851

Sehgala, Devinder ; Bhattacharya, Alok ; Bhattacharya, Sudha (1993) Analysis of a polymorphic locus present upstream of rDNA transcription units in the extrachromosomal circle of Entamoeba histolytica Molecular and Biochemical Parasitology, 62 (1). pp. 129-130. ISSN 0166-6851

Prasad, Ramasare ; Tola, Monika ; Bhattacharya, Sudha ; Sharma, M. P. ; Bhattacharya, Alok (1992) Recognition of entamoeba histolytica lipophosphoglycan by a strain-specific monoclonal antibody and human immune sera Molecular and Biochemical Parasitology, 56 (2). pp. 279-287. ISSN 0166-6851

Mittal, Vivek ; Sehgal, Devinder ; Bhattacharya, Alok ; Bhattacharya, Sudha (1992) A second short repeat sequence detected downstream of rRNA genes in the entamoeba histolytica rDNA episome Molecular and Biochemical Parasitology, 54 (1). pp. 97-100. ISSN 0166-6851

Prasad, Jayendra ; Bhattacharya, Sudha ; Bhattacharya, Alok (1992) Cloning and sequence analysis of a calcium-binding protein gene from a pathogenic strain of entamoeba histolytica Molecular and Biochemical Parasitology, 52 (1). pp. 137-140. ISSN 0166-6851

Bhattacharya, Sudha ; Bhattacharya, Alok ; Diamond, Louis S. (1992) Entamoeba histolytica extrachromosomal circular ribosomal DNA: analysis of clonal variation in a hypervariable region Experimental Parasitology, 74 (2). pp. 200-204. ISSN 0014-4894

Mittal, Vivek ; Bhattacharya, Alok ; Shantanu Bhattacharya, Shantanu (1992) Organization of repeated sequences in the region downstream to rRNA genes in the rDNA episome of Entamoeba histolytica Archives of Medical Research, 23 (2). pp. 17-18. ISSN 0188-4409

Bhattacharya, Alok ; Bhattacharya, Sudha ; Sharma, M. P. ; Diamond, Louis S. (1990) Metabolic labeling of entamoeba histolytica antigens: characterization of a 28-kDa major intracellular antigen Experimental Parasitology, 70 (3). pp. 255-263. ISSN 0014-4894

Bhattacharya, Sudha ; Bhattacharya, Alok ; Diamond, Louis S. ; Soldo, Anthony T. (1989) Circular DNA of entamoeba histolytica encodes ribosomal RNA Journal of Eukaryotic Microbiology, 36 (5). pp. 455-458. ISSN 1066-5234

Bhattacharya, Sudha ; Bhattacharya, Alok ; Diamond, Louis S. (1988) Comparison of repeated DNA from strains of entamoeba histolytica and other entamoeba Molecular and Biochemical Parasitology, 27 (2-3). pp. 257-262. ISSN 0166-6851

Band, Hamid ; Bhattacharya, Alok ; Talwar, Gursaran P. (1986) Mechanism of phagocytosis by Schwann cell Journal of the Neurological Sciences, 75 (1). pp. 113-119. ISSN 0022-510X

Bhattacharya, Sudha ; Ranadive, Satish N. ; Bhattacharya, Alok (1986) Expression of Mycobacterium tuberculosis genes in Escherichia coli Journal of Biosciences, 10 (2). pp. 277-281. ISSN 0250-5991