Items where Author is "Azam, Sarwar"

Article

Azam, Sarwar ; Parthasarathy, Sunil ; Singh, Chhaya ; Kumar, Shakti ; Siddavattam, Dayananda ; Ochman, Howard (2019) Genome Organization and Adaptive Potential of Archetypal Organophosphate Degrading Sphingobium fuliginis ATCC 27551 Genome Biology and Evolution, 11 (9). pp. 2557-2562. ISSN 1759-6653

Parthasarathy, Sunil ; Azam, Sarwar ; Lakshman Sagar, Annapoorni ; Narasimha Rao, Veera ; Gudla, Ramurthy ; Paraptla, Hari ; Yakkala, Harshita ; Ghanta Vemuri, Sujana ; Siddavattam, Dayananda (2017) Genome-guided insights reveal organophosphate-degrading Brevundimonas diminuta as Sphingopyxis wildii and define its versatile metabolic capabilities and environmental adaptations Genome Biology and Evolution, 9 (1). pp. 77-81. ISSN 1759-6653

Williams, Angela H. ; Sharma, Mamta ; Thatcher, Louise F. ; Azam, Sarwar ; Hane, James K. ; Sperschneider, Jana ; Kidd, Brendan N. ; Anderson, Jonathan P. ; Ghosh, Raju ; Garg, Gagan ; Lichtenzveig, Judith ; Kistler, H. Corby ; Shea, Terrance ; Young, Sarah ; Buck, Sally-Anne G. ; Kamphuis, Lars G. ; Saxena, Rachit ; Pande, Suresh ; Ma, Li-Jun ; Varshney, Rajeev K. ; Singh, Karam B. (2016) Comparative genomics and prediction of conditionally dispensable sequences in legume–infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors BMC Genomics, 17 (1). ISSN 1471-2164

Sinha, Pallavi ; Pazhamala, Lekha T. ; Singh, Vikas K. ; Saxena, Rachit K. ; Krishnamurthy, L. ; Azam, Sarwar ; Khan, Aamir W. ; Varshney, Rajeev K. (2016) Identification and Validation of Selected Universal Stress Protein Domain Containing Drought-Responsive Genes in Pigeonpea (Cajanus cajan L.) Frontiers in Plant Science, 6 . ISSN 1664-462X

Jaganathan, Deepa ; Thudi, Mahendar ; Kale, Sandip ; Azam, Sarwar ; Roorkiwal, Manish ; Gaur, Pooran M. ; Kishor, P B Kavi ; Nguyen, Henry ; Sutton, Tim ; Varshney, Rajeev K. (2015) Genotyping-by-sequencing based intra-specific genetic map refines a ‘‘QTL-hotspot” region for drought tolerance in chickpea Molecular Genetics and Genomics, 290 (2). pp. 559-571. ISSN 1617-4615

Mir, Reyazul Rouf ; Kudapa, Himabindu ; Srikanth, Sandhya ; Saxena, Rachit K. ; Sharma, Ashutosh ; Azam, Sarwar ; Saxena, Kulbhushan ; Varma Penmetsa, R. ; Varshney, Rajeev K. (2014) Candidate gene analysis for determinacy in pigeonpea (Cajanus spp.) Theoretical and Applied Genetics (TAG), 127 (12). pp. 2663-2678. ISSN 0040-5752

Lukens, Lewis ; Kudapa, Himabindu ; Azam, Sarwar ; Sharpe, Andrew G. ; Taran, Bunyamin ; Li, Rong ; Deonovic, Benjamin ; Cameron, Connor ; Farmer, Andrew D. ; Cannon, Steven B. ; Varshney, Rajeev K. (2014) Comprehensive Transcriptome Assembly of Chickpea (Cicer arietinum L.) Using Sanger and Next Generation Sequencing Platforms: Development and Applications PLoS One, 9 (1). e86039. ISSN 1932-6203

Prasad, Manoj ; Azam, Sarwar ; Rathore, Abhishek ; Shah, Trushar M. ; Telluri, Mohan ; Amindala, BhanuPrakash ; Ruperao, Pradeep ; Katta, Mohan A. V. S. K. ; Varshney, Rajeev K. (2014) An Integrated SNP Mining and Utilization (ISMU) Pipeline for Next Generation Sequencing Data PLoS One, 9 (7). e101754. ISSN 1932-6203

Varshney, Rajeev K. ; Mir, Reyazul Rouf ; Bhatia, Sabhyata ; Thudi, Mahendar ; Hu, Yuqin ; Azam, Sarwar ; Zhang, Yong ; Jaganathan, Deepa ; You, Frank M. ; Gao, Jinliang ; Riera-Lizarazu, Oscar ; Luo, Ming-Cheng (2014) Integrated physical, genetic and genome map of chickpea (Cicer arietinum L.) Functional & Integrative Genomics, 14 (1). pp. 59-73. ISSN 1438-793X

Ruperao, Pradeep ; Chan, Chon-Kit Kenneth ; Azam, Sarwar ; Karafiátová, Miroslava ; Hayashi, Satomi ; Čížková, Jana ; Saxena, Rachit K. ; Šimková, Hana ; Song, Chi ; Vrána, Jan ; Chitikineni, Annapurna ; Visendi, Paul ; Gaur, Pooran M. ; Millán, Teresa ; Singh, Karam B. ; Taran, Bunyamin ; Wang, Jun ; Batley, Jacqueline ; Doležel, Jaroslav ; Varshney, Rajeev K. ; Edwards, David (2014) A chromosomal genomics approach to assess and validate thedesiandkabulidraft chickpea genome assemblies Plant Biotechnology, 12 (6). pp. 778-786. ISSN 1467-7644

Kim, Dong Hyun ; Parupalli, Swathi ; Azam, Sarwar ; Lee, Suk-Ha ; Varshney, Rajeev K. (2013) Comparative sequence analysis of nitrogen fixation-related genes in six legumes Frontiers in Plant Science, 4 . ISSN 1664-462X

Varshney, Rajeev K. ; Song, Chi ; Saxena, Rachit K. ; Azam, Sarwar ; Yu, Sheng ; Sharpe, Andrew G. ; Cannon, Steven ; Baek, Jongmin ; Rosen, Benjamin D. ; Tar'an, Bunyamin ; Millan, Teresa ; Zhang, Xudong ; Ramsay, Larissa D. ; Iwata, Aiko ; Wang, Ying ; Nelson, William ; Farmer, Andrew D. ; Gaur, Pooran M. ; Soderlund, Carol ; Penmetsa, R Varma ; Xu, Chunyan ; Bharti, Arvind K. ; He, Weiming ; Winter, Peter ; Zhao, Shancen ; Hane, James K. ; Carrasquilla-Garcia, Noelia ; Condie, Janet A. ; Upadhyaya, Hari D. ; Luo, Ming-Cheng ; Thudi, Mahendar ; Gowda, C. L. L. ; Singh, Narendra P. ; Lichtenzveig, Judith ; Gali, Krishna K. ; Rubio, Josefa ; Nadarajan, N. ; Dolezel, Jaroslav ; Bansal, Kailash C ; Xu, Xun ; Edwards, David ; Zhang, Gengyun ; Kahl, Guenter ; Gil, Juan ; Singh, Karam B. ; Datta, Swapan K. ; Jackson, Scott A. ; Wang, Jun ; Cook, Douglas R. (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement Nature Biotechnology, 31 (3). pp. 240-246. ISSN 1087-0156

Varshney, Rajeev K ; Song, Chi ; Saxena, Rachit K ; Azam, Sarwar ; Yu, Sheng ; Sharpe, Andrew G ; Cannon, Steven ; Baek, Jongmin ; Rosen, Benjamin D ; Tar'an, Bunyamin ; Millan, Teresa ; Zhang, Xudong ; Ramsay, Larissa D ; Iwata, Aiko ; Wang, Ying ; Nelson, William ; Farmer, Andrew D ; Gaur, Pooran M ; Soderlund, Carol ; Penmetsa, R Varma ; Xu, Chunyan ; Bharti, Arvind K ; He, Weiming ; Winter, Peter ; Zhao, Shancen ; Hane, James K ; Carrasquilla-Garcia, Noelia ; Condie, Janet A ; Upadhyaya, Hari D ; Luo, Ming-Cheng ; Thudi, Mahendar ; Gowda, C L L ; Singh, Narendra P ; Lichtenzveig, Judith ; Gali, Krishna K ; Rubio, Josefa ; Nadarajan, N ; Dolezel, Jaroslav ; Bansal, Kailash C ; Xu, Xun ; Edwards, David ; Zhang, Gengyun ; Kahl, Guenter ; Gil, Juan ; Singh, Karam B ; Datta, Swapan K ; Jackson, Scott A ; Wang, Jun ; Cook, Douglas R (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement Nature Biotechnology, 31 (3). pp. 240-246. ISSN 1087-0156

Azam, Sarwar ; Thakur, Vivek ; Ruperao, Pradeep ; Shah, Trushar ; Balaji, Jayashree ; Amindala, BhanuPrakash ; Farmer, Andrew D. ; Studholme, David J. ; May, Gregory D. ; Edwards, David ; Jones, Jonathan D. G. ; Varshney, Rajeev K. (2012) Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome American Journal of Botany, 99 (2). pp. 186-192. ISSN 0002-9122

Chen, Xiaoping ; Zhu, Wei ; Azam, Sarwar ; Li, Heying ; Zhu, Fanghe ; Li, Haifen ; Hong, Yanbin ; Liu, Haiyan ; Zhang, Erhua ; Wu, Hong ; Yu, Shanlin ; Zhou, Guiyuan ; Li, Shaoxiong ; Zhong, Ni ; Wen, Shijie ; Li, Xingyu ; Knapp, Steve J. ; Ozias-Akins, Peggy ; Varshney, Rajeev K. ; Liang, Xuanqiang (2012) Deep sequencing analysis of the transcriptomes of peanut aerial and subterranean young pods identifies candidate genes related to early embryo abortion Plant Biotechnology, 11 (1). pp. 115-127. ISSN 1467-7644

Varshney, Rajeev K ; Chen, Wenbin ; Li, Yupeng ; Bharti, Arvind K ; Saxena, Rachit K ; Schlueter, Jessica A ; Donoghue, Mark T A ; Azam, Sarwar ; Fan, Guangyi ; Whaley, Adam M ; Farmer, Andrew D ; Sheridan, Jaime ; Iwata, Aiko ; Tuteja, Reetu ; Penmetsa, R Varma ; Wu, Wei ; Upadhyaya, Hari D ; Yang, Shiaw-Pyng ; Shah, Trushar ; Saxena, K B ; Michael, Todd ; McCombie, W Richard ; Yang, Bicheng ; Zhang, Gengyun ; Yang, Huanming ; Wang, Jun ; Spillane, Charles ; Cook, Douglas R ; May, Gregory D ; Xu, Xun ; Jackson, Scott A (2012) Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers Nature Biotechnology, 30 (1). pp. 83-89. ISSN 1087-0156