Items where Author is "Ayappa, K. Ganapathy"

Ilangumaran Ponmalar, Ilanila ; Ayappa, K. Ganapathy ; Basu, Jaydeep K. (2021) Bacterial protein listeriolysin O induces nonmonotonic dynamics because of lipid ejection and crowding Biophysical Journal, 120 (15). pp. 3040-3049. ISSN 0006-3495

Sathyanarayana, Pradeep ; Visweswariah, Sandhya S. ; Ayappa, K. Ganapathy (2021) Mechanistic Insights into Pore Formation by an α-Pore Forming Toxin: Protein and Lipid Bilayer Interactions of Cytolysin A Accounts of Chemical Research, 54 (1). pp. 120-131. ISSN 0001-4842

Ilangumaran Ponmalar, Ilanila ; Sarangi, Nirod K. ; Basu, Jaydeep K. ; Ayappa, K. Ganapathy (2021) Pore Forming Protein Induced Biomembrane Reorganization and Dynamics: A Focused Review Frontiers in Molecular Biosciences, 8 . ISSN 2296-889X

Desikan, Rajat ; Maiti, Prabal K. ; Ayappa, K. Ganapathy (2021) Predicting interfacial hot-spot residues that stabilize protein-protein interfaces in oligomeric membrane-toxin pores through hydrogen bonds and salt bridges Journal of Biomolecular Structure & Dynamics, 39 (1). pp. 20-34. ISSN 0739-1102

Desikan, Rajat ; Behera, Amit ; Maiti, Prabal K. ; Ayappa, K. Ganapathy (2021) Using multiscale molecular dynamics simulations to obtain insights into pore forming toxin mechanisms Methods in Enzymology, 649 . pp. 461-502. ISSN 0076-6879

Sharma, Pradyumn ; Parthasarathi, Srividhya ; Patil, Nivedita ; Waskar, Morris ; Raut, Janhavi S. ; Puranik, Mrinalini ; Ayappa, K. Ganapathy ; Basu, Jaydeep Kumar (2020) Assessing Barriers for Antimicrobial Penetration in Complex Asymmetric Bacterial Membranes: A Case Study with Thymol Langmuir, 36 (30). pp. 8800-8814. ISSN 0743-7463

Ponmalar, Ilanila I. ; Cheerla, Ramesh ; Ayappa, K. Ganapathy ; Basu, Jaydeep K. (2019) Correlated protein conformational states and membrane dynamics during attack by pore-forming toxins Proceedings of the National Academy of Sciences, 116 (26). pp. 12839-12844. ISSN 0027-8424

Desikan, Rajat ; Maiti, Prabal K. ; Ayappa, K. Ganapathy (2019) An In silico Algorithm for Identifying Amino Acids that Stabilize Oligomeric Membrane-Toxin Pores through Electrostatic Interactions bioRxiv .

Sathyanarayana, Pradeep ; Maurya, Satyaghosh ; Behera, Amit ; Ravichandran, Monisha ; Visweswariah, Sandhya S. ; Ayappa, K. Ganapathy ; Roy, Rahul (2018) Cholesterol promotes Cytolysin A activity by stabilizing the intermediates during pore formation PNAS, 115 (31). ISSN 0027-8424

Sathyanarayana, Pradeep ; Desikan, Rajat ; Ayappa, K. Ganapathy ; Visweswariah, Sandhya S. (2016) The Solvent-Exposed C-Terminus of the Cytolysin A Pore-Forming Toxin Directs Pore Formation and Channel Function in Membranes Biochemistry, 55 (42). pp. 5952-5961. ISSN 0006-2960

Dutta, Debosruti ; Wood, Brandon C. ; Bhide, Shreyas Y. ; Ayappa, K. Ganapathy ; Narasimhan, Shobhana (2014) Enhanced Gas Adsorption on Graphitic Substrates via Defects and Local Curvature: A Density Functional Theory Study Journal of Physical Chemistry C, 118 (15). pp. 7741-7750. ISSN 1932-7447