Alam, Md. Jahoor ; Devi, Gurumayum Reenaroy ; Singh, Brojen R. K. ; Ramaswamy, R. ; Thakur, Sonu Chand ; Sharma, Indrajit B. (2012) Stochastic synchronization of interacting pathways in testosterone model Computational Biology and Chemistry, 41 . pp. 10-17. ISSN 1476-9271
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Official URL: http://www.sciencedirect.com/science/article/pii/S...
Related URL: http://dx.doi.org/10.1016/j.compbiolchem.2012.08.001
Abstract
We examine the possibilities of various coupling mechanisms among a group of identical stochastic oscillators via Chemical Langevin formalism where each oscillator is modeled by stochastic model of testosterone (T) releasing pathway. Our results show that the rate of synchrony among the coupled oscillators depends on various parameters namely fluctuating factor, coupling constants ϵ, and interestingly on system size. The results show that synchronization is achieved much faster in classical deterministic system rather than stochastic system. Then we do large scale simulation of such coupled pathways using stochastic simulation algorithm and the detection of synchrony is measured by various order parameters such as synchronization manifolds, phase plots etc and found that the proper synchrony of the oscillators is maintained in different coupling mechanisms and support our theoretical claims. We also found that the coupling constant follows power law behavior with the systems size (V) by ϵ∼ AV−γ, where γ = 1 and A is a constant. We also examine the phase transition like behavior in all coupling mechanisms that we have considered for simulation. The behavior of the system is also investigated at thermodynamic limit; where V→ ∞, molecular population, N→ ∞ but N/V → finite, to see the role of noise in information processing and found the destructive role in the rate of synchronization.
Item Type: | Article |
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Source: | Copyright of this article belongs to Elsevier Science. |
Keywords: | Cell Signaling; Synchronization; Coupling; Intercellular Communication; Intracellular Communication |
ID Code: | 98814 |
Deposited On: | 14 May 2015 06:28 |
Last Modified: | 14 May 2015 06:28 |
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